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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA02G491010
Reference: TK1151 Chr: Chr02 Coordinates: 125524860-125525195 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

336 bp · TkA02G491010|TK1151|cDNA

ATGCCTACAATGTTGACTACATATAGTCAAGCTTTTCACATTACAACAATCAAAGCCTTGATTGATGGATCACCAGGACTTGAGATTCCAACAATCACCCCCGAATCTCTAAGTCCTTCTAGAGATCCCCTCCTTCCTGAACCGCGTTTAGAAAACGGGTTCGTCATTGTCCTCGCATCCCGAAGAATCACCGACTTGCGATTTTTCGAGTCGTTCCGGACACTCGGACGCATAATGGCCCGGTTTATCGCATCGGTAAC...

336 bp · TkA02G491010|TK1151|CDS

ATGCCTACAATGTTGACTACATATAGTCAAGCTTTTCACATTACAACAATCAAAGCCTTGATTGATGGATCACCAGGACTTGAGATTCCAACAATCACCCCCGAATCTCTAAGTCCTTCTAGAGATCCCCTCCTTCCTGAACCGCGTTTAGAAAACGGGTTCGTCATTGTCCTCGCATCCCGAAGAATCACCGACTTGCGATTTTTCGAGTCGTTCCGGACACTCGGACGCATAATGGCCCGGTTTATCGCATCGGTAAC...

111 aa · TkA02G491010|TK1151|PROTEIN

MPTMLTTYSQAFHITTIKALIDGSPGLEIPTITPESLSPSRDPLLPEPRLENGFVIVLASRRITDLRFFESFRTLGRIMARFIASVTNNFDRFFFRVSPIFLATITIAFFI

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G491010
TK1151 IDTkA02G491010
OH-1004 IDLXL04_015627
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)94.400
Protein coverage (%)TK1151 81.081 / OH-1004 20.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G491010
LocationChr02:125524860-125525195 (+)
DescriptionSimilar to At5g39000: Putative receptor-like protein kinase At5g39000
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015627 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009741 response to brassinosteroid Biological Process
GO:0009826 unidimensional cell growth Biological Process
GO:0010038 response to metal ion Biological Process
GO:0010183 pollen tube guidance Biological Process
GO:0010483 pollen tube reception Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009536 plastid Cellular Component
GO:0016324 apical plasma membrane Cellular Component
GO:0043680 filiform apparatus Cellular Component
GO:0090404 pollen tube tip Cellular Component
KEGG gene cross-reference
ath:AT3G04690
ath:AT3G46290
ath:AT5G28680
ath:AT5G38990
ath:AT5G39000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.240
Rank 1 · TkA02G491010 · TK1151
Plastid0.224
Rank 2 · TkA02G491010 · TK1151
Cytoplasm0.221
Rank 3 · TkA02G491010 · TK1151
Nucleus0.164
Rank 4 · TkA02G491010 · TK1151
Cell membrane0.116
Rank 5 · TkA02G491010 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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