Gene Card
Gene overview
cDNA / CDS / Protein Sequences
921 bp · TkA02G446850|TK1151|cDNA
TTTTTTTTATCCAAATTAAATAATGTTTACAATAAAGTAAAAAAAAATTCTGGTTGTTATTATAGGTAGGTGCACACACCGAAACAGAACTTGAAGACCGAAAACTAAGAATCGAGGACGCAAAAAACGCGACATATGCAGCCATGGACGAAGGTATAGTGCCAGGTGGCGGTGCCACGTACATCCACCTTCTAGAAGAAATTCCATCGATTAAAAAGTTAATGGAAGATCCAGATGAAGAAACTGGTGCCAATATCATA...
411 bp · TkA02G446850|TK1151|CDS
ATGGACGAAGGTATAGTGCCAGGTGGCGGTGCCACGTACATCCACCTTCTAGAAGAAATTCCATCGATTAAAAAGTTAATGGAAGATCCAGATGAAGAAACTGGTGCCAATATCATAGCATCTGCACTTGAAGCGCCTACAAAACTGATAGCAAGGAATGCGGGGGTGGATGGTGATGTGGTGGTTGAGAAGGTGAAGGGACTTGATTGGGAGTTTGGGTATAATGCAATGAGTGATAGTTATGAGGATCTTGTGGTGAG...
Protein
Download Protein FASTA136 aa · TkA02G446850|TK1151|PROTEIN
MDEGIVPGGGATYIHLLEEIPSIKKLMEDPDEETGANIIASALEAPTKLIARNAGVDGDVVVEKVKGLDWEFGYNAMSDSYEDLVVRGVIDPCRVSRCALQNAVSIAGIILTTQAVLVDKVKEKKPPVPLLPGINP
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G446850 |
|---|---|
| TK1151 ID | TkA02G446850 |
| OH-1004 ID | LXL04_002116 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 47.300 |
| Protein coverage (%) | TK1151 94.118 / OH-1004 21.227Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G446850 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:113598967-113599964 (+) | |||||||||
| Description | Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006457 protein folding Biological Process GO:0009409 response to cold Biological Process GO:0009627 systemic acquired resistance Biological Process GO:0042026 protein refolding Biological Process GO:0005634 nucleus Cellular Component GO:0005730 nucleolus Cellular Component GO:0005739 mitochondrion Cellular Component GO:0009507 chloroplast Cellular Component GO:0009536 plastid Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0010319 stromule Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G55490 ath:AT3G13470 ath:AT5G56500 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00118Cpn60_TCP12-120 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G446850 | PF00118 | Cpn60_TCP1 | 2 | 120 | 1.1e-24 | 87.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.