Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1372 bp · TkA02G442990|TK1151|cDNA
TAAGAAATAACGATGTCCATAGATTTAGCATGATGTAGAAGAAACAGATCCACGGACATGTTTGCAATATAAATTGAACCCCAGAAGTTGCAGGGTATTGATTTCCATTCCAACGCATCTCGATTCCCCAAATCTGTTGAAACCGACAGGGAAGGCGATCCCCTCACTAACCCCGAGGCCCTTCATCCCACAGGAGAAAGGTAGAATGGAGGATGAACCGAAAAAGGAGCACAAAAAGACTATCTGGATGCTCGACCCTC...
936 bp · TkA02G442990|TK1151|CDS
ATGGAGGATGAACCGAAAAAGGAGCACAAAAAGACTATCTGGATGCTCGACCCTCCTACAGACAGACCGGTTCGTGTCTACGCTGACGGCATATATGATCTCTTCCACTTCGGACATGCTCGCTCCCTCGAACAAGCAAAGAAATCGTTTCCAAATACTTATCTGTTGGTTGGATGCTGCAATGATGAGGTCACCCACAGCCTAAAGGGCAAAACAGTCATGACTGACAAGGAGCGATATGAATCTCTTCGCCATTGCAA...
Protein
Download Protein FASTA311 aa · TkA02G442990|TK1151|PROTEIN
MEDEPKKEHKKTIWMLDPPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEVTHSLKGKTVMTDKERYESLRHCKWVDEVIPDAPWVMNQEFIDKHKIDYVAHDSLPYADASGAGNDVYEFVKSIGRFKETKRTEGISTSDIIMRIVKDYNDYVMRNLDRGYSRKDLGVSYVKEKRLRVNMSLRKLHEKVKKQQEKVEEKIVAKTAGMNHNLWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLK...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G442990 |
|---|---|
| TK1151 ID | TkA02G442990 |
| OH-1004 ID | LXL04_005964 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 90.600 |
| Protein coverage (%) | TK1151 84.566 / OH-1004 89.153Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G442990 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:112639963-112642997 (+) | |||||||||
| Description | Similar to CCT2: Choline-phosphate cytidylyltransferase 2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006656 phosphatidylcholine biosynthetic process Biological Process GO:0006657 CDP-choline pathway Biological Process GO:0007283 spermatogenesis Biological Process GO:1904116 response to vasopressin Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0004105 choline-phosphate cytidylyltransferase activity Molecular Function GO:0031210 phosphatidylcholine binding Molecular Function GO:0042802 identical protein binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G32260 ath:AT4G15130 hsa:9468 mmu:236899 rno:286936 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01467CTP_transf_like27-156 aaPF18690DUF563931-53 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G442990 | PF01467 | CTP_transf_like | 27 | 156 | 1.5e-32 | 113.3 |
| TkA02G442990 | PF18690 | DUF5639 | 31 | 53 | 0.017 | 15.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.