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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G373690
Reference: TK1151 Chr: Chr02 Coordinates: 95127885-95134019 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1992 bp · TkA02G373690|TK1151|cDNA

ATGATGATCATGCGAAATTCCGATCCAAGCAATCAAGATGGCAACCGTGACGAAATCCTTGTTGCTTGCGGAGATCCCTTCACTGATGTTCATGGAGATAGAACAGGGGTCGCTCGCTGGGGATATGATGAGAAGAAGAGGCTATTTTATGTGCGAAGAAACAGCAATCGTGAGGAGTACTTCAAGTTCAGATCACAGTTTCATTCCTTCACTGCTATTGGTCTTCAAGAGCTGATTCGAGCCCCCTTCTTCAATCCGTC...

CDS

Download CDS FASTA

1992 bp · TkA02G373690|TK1151|CDS

ATGATGATCATGCGAAATTCCGATCCAAGCAATCAAGATGGCAACCGTGACGAAATCCTTGTTGCTTGCGGAGATCCCTTCACTGATGTTCATGGAGATAGAACAGGGGTCGCTCGCTGGGGATATGATGAGAAGAAGAGGCTATTTTATGTGCGAAGAAACAGCAATCGTGAGGAGTACTTCAAGTTCAGATCACAGTTTCATTCCTTCACTGCTATTGGTCTTCAAGAGCTGATTCGAGCCCCCTTCTTCAATCCGTC...

Protein

Download Protein FASTA

663 aa · TkA02G373690|TK1151|PROTEIN

MMIMRNSDPSNQDGNRDEILVACGDPFTDVHGDRTGVARWGYDEKKRLFYVRRNSNREEYFKFRSQFHSFTAIGLQELIRAPFFNPSNDVQATNFVRFLERQARKGFPNFHTAKARITRIQGMLDENGNTYTHVMWPPTKKEKVIPMAKPLPDGSLRTIEFWVYDSKSFEAVIKIEKNCIRVRNAKDLVMFREHDIKILSRVQITVLDPSHEEAAKEYTSMVAHIINKKFWAGALDGMDLESLQFLDLSSLGLTEFPDIF...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G373690
TK1151 IDTkA02G373690
OH-1004 IDLXL04_023914
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)73.600
Protein coverage (%)TK1151 32.579 / OH-1004 80.435
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G373690
LocationChr02:95127885-95134019 (-)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g11170 Putative disease resistance protein At4g11170. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023914 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)No functional description available
KEGG gene cross-referenceNo functional description available
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.388
Rank 1 · TkA02G373690 · TK1151
Nucleus0.381
Rank 2 · TkA02G373690 · TK1151
Cell membrane0.248
Rank 3 · TkA02G373690 · TK1151
Endoplasmic reticulum0.099
Rank 4 · TkA02G373690 · TK1151
Mitochondrion0.052
Rank 5 · TkA02G373690 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF23952LRR_EndoS235-276 aa
PF13855LRR_8238-250 aa
PF23598LRR_14239-259 aa
PF23286LRR_13240-310 aa
PF25013LRR_Zer-1240-303 aa
PF12799LRR_4241-250 aa
PF13855LRR_8242-299 aa
PF00560LRR_1242-261 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G373690PF23952LRR_EndoS2352760.001419.5
TkA02G373690PF13855LRR_82382502.1e-1350.5
TkA02G373690PF23598LRR_142392596.8e-2794.8
TkA02G373690PF23286LRR_132403104.9e-1040.2
TkA02G373690PF25013LRR_Zer-12403030.001919.1
TkA02G373690PF12799LRR_42412502.9e-0834.4
TkA02G373690PF13855LRR_82422992.1e-1350.5
TkA02G373690PF00560LRR_12422619.1e-0728.5
TkA02G373690PF25019LRR_R13L1-DRL212673212.2e-1247.7
TkA02G373690PF12799LRR_42673062.9e-0834.4
TkA02G373690PF00560LRR_12672889.1e-0728.5
TkA02G373690PF23598LRR_142683216.8e-2794.8
TkA02G373690PF24758LRR_At5g563702683270.0007220.0
TkA02G373690PF23952LRR_EndoS2693450.001419.5
TkA02G373690PF23247LRR_RPS22793210.005117.5
TkA02G373690PF25013LRR_Zer-12863460.001919.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O82500Arabidopsis thalianasp|O82500|Y4117_ARATH Putative disease resistance protein At4g1117045.600%Swiss-ProtLow

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