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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G320320
Reference: TK1151 Chr: Chr02 Coordinates: 81353491-81354837 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1164 bp · TkA02G320320|TK1151|cDNA

ATGGACCCAAACCTATTCGATGCATCCTTAACAGGAAACGTACAACTCCTTAATACATTACTCCAAGAAGATGAACTCGTTCTCGACAGAATTCCACTCAGCTGCTTCAAAGAGACACCCTTGCACATTGCATCCTTGAGAGGCCACCTCGATATCGGACACGTGGAGATCGTACGTGAGCTCTTGAAAGTGATGAATCCTGATGCTTGGAGTTTTCATGACCAAGATGGACGAACACCTCTGCACTTGGCTTCCATGAA...

CDS

Download CDS FASTA

1164 bp · TkA02G320320|TK1151|CDS

ATGGACCCAAACCTATTCGATGCATCCTTAACAGGAAACGTACAACTCCTTAATACATTACTCCAAGAAGATGAACTCGTTCTCGACAGAATTCCACTCAGCTGCTTCAAAGAGACACCCTTGCACATTGCATCCTTGAGAGGCCACCTCGATATCGGACACGTGGAGATCGTACGTGAGCTCTTGAAAGTGATGAATCCTGATGCTTGGAGTTTTCATGACCAAGATGGACGAACACCTCTGCACTTGGCTTCCATGAA...

Protein

Download Protein FASTA

387 aa · TkA02G320320|TK1151|PROTEIN

MDPNLFDASLTGNVQLLNTLLQEDELVLDRIPLSCFKETPLHIASLRGHLDIGHVEIVRELLKVMNPDAWSFHDQDGRTPLHLASMNEQLDVIKVLIEVKPDLGRDLQENGETILHSCISCNRFEAMKLLSQLWSDEELAIQKDGNGNTLLHLAVVQKQIQTVKYLLEKPSIKATGNIVNGHGFTPLDVLDHCPQDLASLQIRSLLMEANFQKPKGDNHHFGPFQRSTKHKGEWMEKQRGILLLAAILVAVISFDSGLHP...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G320320
TK1151 IDTkA02G320320
OH-1004 IDLXL04_015527
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)83.500
Protein coverage (%)TK1151 75.452 / OH-1004 75.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G320320
LocationChr02:81353491-81354837 (-)
DescriptionSimilar to BAD1: Ankyrin repeat-containing protein BDA1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015527 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009751 response to salicylic acid Biological Process
GO:0045087 innate immune response Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005886 plasma membrane Cellular Component
KEGG gene cross-reference
ath:AT2G01680
ath:AT5G02620
ath:AT5G54610
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.419
Rank 1 · TkA02G320320 · TK1151
Endoplasmic reticulum0.231
Rank 2 · TkA02G320320 · TK1151
Cytoplasm0.177
Rank 3 · TkA02G320320 · TK1151
Nucleus0.146
Rank 4 · TkA02G320320 · TK1151
Lysosome / Vacuole0.098
Rank 5 · TkA02G320320 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF12796Ank_25-102 aa
PF13637Ank_45-52 aa
PF24521Ank_KRIT15-113 aa
PF00023Ank8-22 aa
PF13857Ank_58-29 aa
PF13857Ank_533-84 aa
PF13606Ank_337-68 aa
PF00023Ank38-63 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G320320PF12796Ank_251021.1e-40138.8
TkA02G320320PF13637Ank_45521.8e-2073.3
TkA02G320320PF24521Ank_KRIT151130.02914.8
TkA02G320320PF00023Ank8225.2e-2174.3
TkA02G320320PF13857Ank_58292.5e-1247.6
TkA02G320320PF13857Ank_533842.5e-1247.6
TkA02G320320PF13606Ank_337688.7e-2069.2
TkA02G320320PF00023Ank38635.2e-2174.3
TkA02G320320PF12796Ank_2531311.1e-40138.8
TkA02G320320PF13637Ank_453971.8e-2073.3
TkA02G320320PF13857Ank_5741012.5e-1247.6
TkA02G320320PF00023Ank76985.2e-2174.3
TkA02G320320PF13606Ank_3761038.7e-2069.2
TkA02G320320PF13857Ank_51071302.5e-1247.6
TkA02G320320PF12796Ank_21081691.1e-40138.8
TkA02G320320PF13637Ank_41081301.8e-2073.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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