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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G247560
Reference: TK1151 Chr: Chr02 Coordinates: 63562559-63565328 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1378 bp · TkA02G247560|TK1151|cDNA

TGGTAAGAAATAAACATGAAGCGGGTGAATTGTGATGCCTGCGTGGCAGCGTGAATGATGCCTGCGTGTATGGTGTGATATTTATTGCTTCAATTATTTGGATTTTTGTAACAGAGCAGATAAATAGAGAGGAATCAAGAAGGACAACCAACAACAATGGCGACACTGAAGGTACCATCAGCCGTCCCTTCTCCTTCTGAGGACTGTGAGCAACTCCGGAAAGCGTTTGCAGGTTGGGGAACAAATGAGGCATTGATCAT...

CDS

Download CDS FASTA

951 bp · TkA02G247560|TK1151|CDS

ATGGCGACACTGAAGGTACCATCAGCCGTCCCTTCTCCTTCTGAGGACTGTGAGCAACTCCGGAAAGCGTTTGCAGGTTGGGGAACAAATGAGGCATTGATCATTCAGATTCTGGCCCATAGAAATGGTGCTCAACGCAAAAATATTCAGGAAGCATACTTTCAAACATATGGTGAACATCTCCTCAAAGATTTGGACTCTGAGCTTTCAAGCGATTTTCAAAGGGCAGTGATGTTGTGGACATTGGAGCCAGCTGAGCG...

Protein

Download Protein FASTA

316 aa · TkA02G247560|TK1151|PROTEIN

MATLKVPSAVPSPSEDCEQLRKAFAGWGTNEALIIQILAHRNGAQRKNIQEAYFQTYGEHLLKDLDSELSSDFQRAVMLWTLEPAERDAYLANEATKKLTASNWVLMEIACTRSSNHLLAVRKAYHAKYKKSLEEDVAHHTSGDFRKLLVPLVSAFRYEGEEVNMSVAKSEAKIVHQKICDKAYTDDELIRIITTRSKAQLNATLNQYNNQFGNTVTKDLKADPADEYLKFLRSTIKCLTVPEKYYEKVLRLAINKLGTD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G247560
TK1151 IDTkA02G247560
OH-1004 IDLXL04_035794
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)63.800
Protein coverage (%)TK1151 99.684 / OH-1004 99.684
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G247560
LocationChr02:63562559-63565328 (-)
DescriptionSimilar to ANN2: Annexin D2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g65020 May mediate regulated, targeted secretion of Golgi-derived vesicles during seedling development. No verified direct reference in this release
At5g10230 Annexin D7. No verified direct reference in this release
At1g35720 Has a peroxidase activity.
Immunolocalization and histochemical evidence for the association of two different Arabidopsis annexins with secretion during early seedling growth and development.2005 · DOI: 10.1007/s00425-004-1374-7
Peroxidase activity of annexin 1 from Arabidopsis thaliana.2005 · DOI: 10.1016/j.bbrc.2005.08.181
At5g10220 Annexin D6. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_035794 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006970 response to osmotic stress Biological Process
GO:0006979 response to oxidative stress Biological Process
GO:0009408 response to heat Biological Process
GO:0009409 response to cold Biological Process
GO:0009414 response to water deprivation Biological Process
GO:0009639 response to red or far red light Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0009835 fruit ripening Biological Process
GO:0015774 polysaccharide transport Biological Process
GO:0017156 calcium-ion regulated exocytosis Biological Process
GO:0032940 secretion by cell Biological Process
KEGG gene cross-reference
ath:AT1G35720
ath:AT5G10220
ath:AT5G10230
ath:AT5G65020
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.470
Rank 1 · TkA02G247560 · TK1151
Cell membrane0.358
Rank 2 · TkA02G247560 · TK1151
Nucleus0.235
Rank 3 · TkA02G247560 · TK1151
Extracellular0.087
Rank 4 · TkA02G247560 · TK1151
Mitochondrion0.085
Rank 5 · TkA02G247560 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00191Annexin16-79 aa
PF29878CdiI_serr44-74 aa
PF24360DUF751645-64 aa
PF07700HNOB49-76 aa
PF19667DUF617082-109 aa
PF00191Annexin87-152 aa
PF24360DUF7516106-138 aa
PF30745DUF8720125-242 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G247560PF00191Annexin16793.1e-74245.7
TkA02G247560PF29878CdiI_serr44740.2113.1
TkA02G247560PF24360DUF751645641.7e-0525.5
TkA02G247560PF07700HNOB49760.07813.6
TkA02G247560PF19667DUF6170821090.1412.8
TkA02G247560PF00191Annexin871523.1e-74245.7
TkA02G247560PF24360DUF75161061381.7e-0525.5
TkA02G247560PF30745DUF87201252420.02714.5
TkA02G247560PF07700HNOB1582370.07813.6
TkA02G247560PF00191Annexin1722283.1e-74245.7
TkA02G247560PF29878CdiI_serr1992250.2113.1
TkA02G247560PF19667DUF61702192540.1412.8
TkA02G247560PF00191Annexin2483103.1e-74245.7
TkA02G247560PF24360DUF75162702941.7e-0525.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9XEE2Arabidopsis thalianasp|Q9XEE2|ANXD2_ARATH Annexin D269.300%Swiss-ProtHigh
Q9LX07Arabidopsis thalianasp|Q9LX07|ANXD7_ARATH Annexin D769.200%Swiss-ProtHigh
Q9SYT0Arabidopsis thalianasp|Q9SYT0|ANXD1_ARATH Annexin D168.100%Swiss-ProtHigh
Q9LX08Arabidopsis thalianasp|Q9LX08|ANXD6_ARATH Annexin D666.600%Swiss-ProtHigh

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