Gene Card
Gene overview
cDNA / CDS / Protein Sequences
843 bp · TkA02G084730|TK1151|cDNA
ATGACGCCATCCCACATCTATAACGATTGGAATCGTAGAGTAGATGTGGTTGGAAAAGAGGTAGATAAATTACAAGCTGAATACATTTACAAAAAGAAACGGTTTATGTGGCTTTCCGCTAGGCCACGTTCTAAGTTCACCAAGAAATTGAAGAAAGCCGCCTCTCGAGTTTTCGTGCTCATGGAAGAGGAGTCTAGTTTCGTAGATGTTTTGGTTGTCAAGAAACCTACAAGTGTTATAGAGATGGCCACAATTGATAT...
843 bp · TkA02G084730|TK1151|CDS
ATGACGCCATCCCACATCTATAACGATTGGAATCGTAGAGTAGATGTGGTTGGAAAAGAGGTAGATAAATTACAAGCTGAATACATTTACAAAAAGAAACGGTTTATGTGGCTTTCCGCTAGGCCACGTTCTAAGTTCACCAAGAAATTGAAGAAAGCCGCCTCTCGAGTTTTCGTGCTCATGGAAGAGGAGTCTAGTTTCGTAGATGTTTTGGTTGTCAAGAAACCTACAAGTGTTATAGAGATGGCCACAATTGATAT...
Protein
Download Protein FASTA280 aa · TkA02G084730|TK1151|PROTEIN
MTPSHIYNDWNRRVDVVGKEVDKLQAEYIYKKKRFMWLSARPRSKFTKKLKKAASRVFVLMEEESSFVDVLVVKKPTSVIEMATIDITNIQSLQQPLEKILDLLCDQEVSGIRIYGIPGSGTSIVMKGSIKHKDVDQIQQDLVDRLKLDVGVTSKLDLIVEKIIAELTTIKYLLLTEDVNEELDLYDIGLPKSKNGSKVVFTSRLCYICSAIANKQVNVAELTRKEALEMFKSELNRPLLEEKPNIKKVMRHIISWCGHL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G084730 |
|---|---|
| TK1151 ID | TkA02G084730 |
| OH-1004 ID | LXL04_016986 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 55.100 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 30.668Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G084730 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:22005999-22006910 (-) | |||||||||
| Description | Similar to At4g27190: Disease resistance protein At4g27190 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0002220 innate immune response activating cell surface receptor signaling pathway Biological Process GO:0006952 defense response Biological Process GO:0009626 plant-type hypersensitive response Biological Process GO:0016045 detection of bacterium Biological Process GO:0042742 defense response to bacterium Biological Process GO:0098542 defense response to other organism Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005886 plasma membrane Cellular Component GO:0005524 ATP binding Molecular Function GO:0043531 ADP binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G63350 ath:AT4G26090 ath:AT4G27190 ath:AT4G27220 ath:AT5G43730 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF19579FtsL_24-41 aaPF00931NB-ARC94-133 aaPF00931NB-ARC135-234 aaPF19579FtsL_2197-217 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G084730 | PF19579 | FtsL_2 | 4 | 41 | 0.052 | 14.2 |
| TkA02G084730 | PF00931 | NB-ARC | 94 | 133 | 3.9e-13 | 50.1 |
| TkA02G084730 | PF00931 | NB-ARC | 135 | 234 | 3.9e-13 | 50.1 |
| TkA02G084730 | PF19579 | FtsL_2 | 197 | 217 | 0.052 | 14.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.