Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1146 bp · TkA02G045880|TK1151|cDNA
ATGTCCACCGCCGTCGTATCTTTCCTCACCCTCCTCCTCGTCGCCACCGTCTCCACTGCCCTCACCACCTTCCCATCTGATATTGCCGCTCTGAAAGCCATTAAATCCTCCGTCAACCCCACTACTATACCTTCGTTCACTTGTTTATACTCATGGGACTTCACCTCCGATCCTTGTTCGCCGCCGCATGTAACTCATTTCCTCTGTGGATTGTCCTGCTCCGGCAATCGGGTTACTCAGCTTACCCTTGACCCCGCCGG...
1146 bp · TkA02G045880|TK1151|CDS
ATGTCCACCGCCGTCGTATCTTTCCTCACCCTCCTCCTCGTCGCCACCGTCTCCACTGCCCTCACCACCTTCCCATCTGATATTGCCGCTCTGAAAGCCATTAAATCCTCCGTCAACCCCACTACTATACCTTCGTTCACTTGTTTATACTCATGGGACTTCACCTCCGATCCTTGTTCGCCGCCGCATGTAACTCATTTCCTCTGTGGATTGTCCTGCTCCGGCAATCGGGTTACTCAGCTTACCCTTGACCCCGCCGG...
Protein
Download Protein FASTA381 aa · TkA02G045880|TK1151|PROTEIN
MSTAVVSFLTLLLVATVSTALTTFPSDIAALKAIKSSVNPTTIPSFTCLYSWDFTSDPCSPPHVTHFLCGLSCSGNRVTQLTLDPAGYVGTLSPLVSQLTQLITIDLSDNKFSGPIPNSLFFLPNLQTLMLGSNSFSGVIPPSISNLKSLQTLDISRNSLSGSLPKTLTSLTALTRLDLSFNKLTGPIPGLPKNIVQLALKGNSLYGYLLKQSFHGLAQLETVELSENSLTGTIPGWFFLIPSLQQVNLAKNSFTGVEIF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA02G045880 |
|---|---|
| TK1151 ID | TkA02G045880 |
| OH-1004 ID | LXL04_017382 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 99.500 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA02G045880 |
|---|---|
| Location | Chr02:11815268-11816413 (+) |
| Description | Similar to DRT100: DNA damage-repair/toleration protein DRT100 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006281 DNA repair Biological Process GO:0007165 signal transduction Biological Process GO:0009742 brassinosteroid mediated signaling pathway Biological Process GO:0090696 post-embryonic plant organ development Biological Process GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0000166 nucleotide binding Molecular Function GO:0004672 protein kinase activity Molecular Function GO:0005524 ATP binding Molecular Function |
| KEGG gene cross-reference | ath:AT3G12610 dosa:Os04g0576900 osa:4336741 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08263LRRNT_225-60 aaPF00560LRR_171-81 aaPF12799LRR_471-113 aaPF14580LRR_977-183 aaPF25019LRR_R13L1-DRL2186-132 aaPF23598LRR_1491-255 aaPF24048LRR_NXF1-594-112 aaPF25013LRR_Zer-195-186 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA02G045880 | PF08263 | LRRNT_2 | 25 | 60 | 0.00025 | 21.9 |
| TkA02G045880 | PF00560 | LRR_1 | 71 | 81 | 1.5e-25 | 84.4 |
| TkA02G045880 | PF12799 | LRR_4 | 71 | 113 | 2.4e-19 | 69.6 |
| TkA02G045880 | PF14580 | LRR_9 | 77 | 183 | 8.2e-05 | 23.0 |
| TkA02G045880 | PF25019 | LRR_R13L1-DRL21 | 86 | 132 | 0.1 | 13.2 |
| TkA02G045880 | PF23598 | LRR_14 | 91 | 255 | 2.3e-08 | 33.9 |
| TkA02G045880 | PF24048 | LRR_NXF1-5 | 94 | 112 | 0.24 | 11.7 |
| TkA02G045880 | PF25013 | LRR_Zer-1 | 95 | 186 | 0.00013 | 22.8 |
| TkA02G045880 | PF23286 | LRR_13 | 95 | 161 | 0.2 | 12.1 |
| TkA02G045880 | PF13855 | LRR_8 | 98 | 135 | 6.6e-29 | 100.2 |
| TkA02G045880 | PF00560 | LRR_1 | 102 | 121 | 1.5e-25 | 84.4 |
| TkA02G045880 | PF13516 | LRR_6 | 102 | 113 | 4.9e-06 | 26.9 |
| TkA02G045880 | PF24758 | LRR_At5g56370 | 110 | 164 | 0.013 | 15.9 |
| TkA02G045880 | PF24141 | LRR_ComC | 112 | 189 | 0.034 | 14.6 |
| TkA02G045880 | PF13855 | LRR_8 | 124 | 184 | 6.6e-29 | 100.2 |
| TkA02G045880 | PF12799 | LRR_4 | 124 | 161 | 2.4e-19 | 69.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.