Gene Card
Gene overview
cDNA / CDS / Protein Sequences
459 bp · TkA01G627270|TK1151|cDNA
ATGCGGACGGGAAGAAGTTTTGGTCTGCAGAGTCGAAAAGAGCGTTTGTTTTTTGGAAGACAAAAGAGGCTTGCAGAGGTAAAAACGTCTGCGGGCGAGAAGACGTGGTTCAATCAAACTCGAAATCGGCCGGTATTACCTCCGATCGCAGCTAAGCTAGACGTCGCCGGCCCCGAAATCGCCGGCATTAACTCCGTTCGCGACTTTCTAGACCACCGCGCTGTTCTCGACCACTGGACCACCTACAATCGCACCTGTTC...
459 bp · TkA01G627270|TK1151|CDS
ATGCGGACGGGAAGAAGTTTTGGTCTGCAGAGTCGAAAAGAGCGTTTGTTTTTTGGAAGACAAAAGAGGCTTGCAGAGGTAAAAACGTCTGCGGGCGAGAAGACGTGGTTCAATCAAACTCGAAATCGGCCGGTATTACCTCCGATCGCAGCTAAGCTAGACGTCGCCGGCCCCGAAATCGCCGGCATTAACTCCGTTCGCGACTTTCTAGACCACCGCGCTGTTCTCGACCACTGGACCACCTACAATCGCACCTGTTC...
Protein
Download Protein FASTA152 aa · TkA01G627270|TK1151|PROTEIN
MRTGRSFGLQSRKERLFFGRQKRLAEVKTSAGEKTWFNQTRNRPVLPPIAAKLDVAGPEIAGINSVRDFLDHRAVLDHWTTYNRTCSIPPVQPPSCSTPPSCSARPSCSAPLSCSAPPSFFLLFDCVKRLMFKGELHYLAMLALDVMLQGET
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G627270 |
|---|---|
| TK1151 ID | TkA01G627270 |
| OH-1004 ID | LXL04_005690 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 58.300 |
| Protein coverage (%) | TK1151 47.368 / OH-1004 42.169Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G627270 |
|---|---|
| Location | Chr01:158368077-158369263 (+) |
| Description | Similar to CCT1: T-complex protein 1 subunit alpha |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006457 protein folding Biological Process GO:0007021 tubulin complex assembly Biological Process GO:0032212 positive regulation of telomere maintenance via telomerase Biological Process GO:0050821 protein stabilization Biological Process GO:0090666 scaRNA localization to Cajal body Biological Process GO:1904851 positive regulation of establishment of protein localization to telomere Biological Process GO:1904871 positive regulation of protein localization to Cajal body Biological Process GO:1904874 positive regulation of telomerase RNA localization to Cajal body Biological Process GO:0000242 pericentriolar material Cellular Component GO:0000792 heterochromatin Cellular Component GO:0001669 acrosomal vesicle Cellular Component GO:0002199 zona pellucida receptor complex Cellular Component |
| KEGG gene cross-reference | ath:AT3G20050 cge:100689476 hsa:6950 mdo:497250 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF13020NOV_C20-42 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G627270 | PF13020 | NOV_C | 20 | 42 | 0.32 | 11.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.