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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G183070
Reference: TK1151 Chr: Chr01 Coordinates: 46989534-46994118 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2680 bp · TkA01G183070|TK1151|cDNA

AACTGACCTAACTCCTTTTTAACCAAAATTCCATCATCTTTGTATTGGTCATAATTTTGACCATTTCCATTCTATCAATTCCCTTTTTCTTAACACCCAAGTTATGAGAGTTGGTTTTTTCTTTGATTTTGACTAATTTGAATGGAGAAAATGAGAGGATAACTTCCTACGATAGAGTGGGTCAGCTTCTGATGAAGGGTTAAATCTCTTTACTTTTTTTATAATGTAGCAACTACAGTTGTGGGCTGTGGTCTTCATAT...

CDS

Download CDS FASTA

2280 bp · TkA01G183070|TK1151|CDS

ATGATGATGAAGATGAAGGATACCACTAAATCTTTCAAGAGTTTATCTCAAACAATTCATTCACTTCTGGGATTCAAGAACGAAATTGATTCTACATGGGCTAATACAGTTTGTGACATCATCAAAAGCTTGCCATCAACAGCCGACTATGAGAACGATTATGATGATTCAGCTAATGGTCGTGATGATGATCTTGATGATTTTCTCATTCCACAAATTCATGGTGAGCTTGCCGCCTTGAATGAGGAGGTTTGTCGATT...

Protein

Download Protein FASTA

759 aa · TkA01G183070|TK1151|PROTEIN

MMMKMKDTTKSFKSLSQTIHSLLGFKNEIDSTWANTVCDIIKSLPSTADYENDYDDSANGRDDDLDDFLIPQIHGELAALNEEVCRLNAQRRQILNQFLQLKGNIRVFCRIRPTINGEKFIHVRPVVPLDSSGILLNFAENKTKLYNFDKVFPPVSSQDEVFSEIEPVIKSALDGYNVCILAYGQTGTGKTFTMEGNEDFAGVVPRTIEALFKQAADSNHTYLFSFSMLEIYLGHLKDLLIPHSKKTSDPMPPCLSIQTD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G183070
TK1151 IDTkA01G183070
OH-1004 IDLXL04_004214
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)89.200
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G183070
LocationChr01:46989534-46994118 (-)
DescriptionSimilar to KIN14T: Kinesin-like protein KIN-14T
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g55550 Kinesin-like protein KIN-14T. No verified direct reference in this release
At5g27950 Kinesin-like protein KIN-14U. No verified direct reference in this release
At5g27550 Kinesin-like protein KIN-14S. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0260100 Kinesin-like protein KIN-14B. No verified direct reference in this release
Os11g0648100 Kinesin-like protein KIN-14O. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_004214 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0051225 spindle assembly Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005871 kinesin complex Cellular Component
GO:0005874 microtubule Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
GO:0016887 ATP hydrolysis activity Molecular Function
KEGG gene cross-reference
ath:AT1G55550
ath:AT5G27550
ath:AT5G27950
dosa:Os01g0260100
dosa:Os11g0648100
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.602
Rank 1 · TkA01G183070 · TK1151
Nucleus0.339
Rank 2 · TkA01G183070 · TK1151
Cell membrane0.080
Rank 3 · TkA01G183070 · TK1151
Mitochondrion0.049
Rank 4 · TkA01G183070 · TK1151
Golgi apparatus0.040
Rank 5 · TkA01G183070 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01920Prefoldin_270-106 aa
PF26346Plectin_PPL71-116 aa
PF12325TMF_TATA_bd72-101 aa
PF04977DivIC72-97 aa
PF17675APG6_N76-100 aa
PF15372DUF460087-102 aa
PF16796Microtub_bd89-240 aa
PF00225Kinesin139-431 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G183070PF01920Prefoldin_2701060.09713.4
TkA01G183070PF26346Plectin_PPL711160.002218.5
TkA01G183070PF12325TMF_TATA_bd721010.1113.3
TkA01G183070PF04977DivIC72971.19.8
TkA01G183070PF17675APG6_N761000.5111.5
TkA01G183070PF15372DUF4600871020.07814.0
TkA01G183070PF16796Microtub_bd892409.4e-39133.5
TkA01G183070PF00225Kinesin1394311.4e-83281.4
TkA01G183070PF16796Microtub_bd3203409.4e-39133.5
TkA01G183070PF12329TMF_DNA_bd3513750.6410.8
TkA01G183070PF27921MIPOL1_C3533770.2412.1
TkA01G183070PF15372DUF46004284780.07814.0
TkA01G183070PF16796Microtub_bd4334799.4e-39133.5
TkA01G183070PF01920Prefoldin_24354770.09713.4
TkA01G183070PF27720SSNA14365000.09213.6
TkA01G183070PF27921MIPOL1_C4404850.2412.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4I1T9Arabidopsis thalianasp|F4I1T9|KN14T_ARATH Kinesin-like protein KIN-14T48.200%Swiss-ProtMedium
Q8W0Y9Arabidopsis thalianasp|Q8W0Y9|KN14U_ARATH Kinesin-like protein KIN-14U39.200%Swiss-ProtMedium
F4K4C5Arabidopsis thalianasp|F4K4C5|KN14S_ARATH Kinesin-like protein KIN-14S40.400%Swiss-ProtMedium
A2ZRG4Oryza sativa subsp. japonicasp|A2ZRG4|KN14B_ORYSJ Kinesin-like protein KIN-14B44.300%Swiss-ProtMedium
B9G2X9Oryza sativa subsp. japonicasp|B9G2X9|KN14O_ORYSJ Kinesin-like protein KIN-14O40.700%Swiss-ProtMedium

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