Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2307 bp · TkA01G115710|TK1151|cDNA
CTAAATTCATGGTTACTATTTATCACACTATTAATTCATGGTTACATTCAATTACAGCAGGAAATACACAACAGTTTATCAACACTCAAGTTATTGATAACATGCTATAAAGACAGACAACATAATAAAATGATCAAACTATTCCATATAAAATGATAAACTATTTCACAATAGTCAATTAGAGGTGCACGTTTATTCTTGTGTATATGTAGCCTGTCATAAATGGATGTTCAAAACTAACGAGGGAAATCATTAAACAG...
678 bp · TkA01G115710|TK1151|CDS
ATGAACAAGGATTTTGTTGATCTATCTAAGATGTTCAATGCGGTTAAATCTCTTGTTCGAGTGCCTTCTGTTGACCCTAAATATAAAATTGCCGTTCTTGCTTCTAAGCAGGACCATTGTCTTGTTGATTTACTGCACGCATGGCAAGATGGAAAACTTCCGGTTCATATAAGCTCTGTAATTAGTAATCATGATAGGGTTCCTAATACTCATGTGATGCGGTTTCTTGAAAGACATGAGATTCCGTATCATTATGTGTC...
Protein
Download Protein FASTA225 aa · TkA01G115710|TK1151|PROTEIN
MNKDFVDLSKMFNAVKSLVRVPSVDPKYKIAVLASKQDHCLVDLLHAWQDGKLPVHISSVISNHDRVPNTHVMRFLERHEIPYHYVSKSKENNVEDEILGLVQDTDFLVLARYMQVLSGNFLKRYGKDVINIHHGLLPSFKGGNPSRQAFEAGVKLIGATSHFVTEELDGGPIIEQMVERVSHKDNLLSFIQKSENLEKQCLMKAIKSYCELRVLPYEDNRTVVF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA01G115710 |
|---|---|
| TK1151 ID | TkA01G115710 |
| OH-1004 ID | LXL04_004752 |
| Relationship / confidence | Rbh Sequence Supported / Probable |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 70.093Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA01G115710 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:29294548-29297898 (-) | |||||||||
| Description | Similar to PURU1: Formyltetrahydrofolate deformylase 1, mitochondrial | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006189 'de novo' IMP biosynthetic process Biological Process GO:0006730 one-carbon metabolic process Biological Process GO:0009853 photorespiration Biological Process GO:0046653 tetrahydrofolate metabolic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0009507 chloroplast Cellular Component GO:0008864 formyltetrahydrofolate deformylase activity Molecular Function GO:0016740 transferase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT4G17360 ath:AT5G47435 bsu:BSU13110 mtu:Rv2964 mtv:RVBD_2964 syn:sll0070 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00551Formyl_trans_N29-206 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA01G115710 | PF00551 | Formyl_trans_N | 29 | 206 | 3.5e-36 | 125.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.