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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA01G044380
Reference: TK1151 Chr: Chr01 Coordinates: 11476995-11477384 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

390 bp · TkA01G044380|TK1151|cDNA

ATGAACCCCTTGGGGAGCTCTTTCCCACACGTATTAACAAGCAAGCTAAGTGAGATCGGGATATTAATGTTGATCCCAAGAACATTGGCTTTCAAAGCAGTACAAAGGCAGGCGGCGACTTCAATGTCAAGAAGGCCGCCAAGGGCTGAGCAACATGGGTGGTCCGGTGGGTTACCAATGACGGTTCCAATGGAGTCATTAAGCAACTTAGCACACACTCCCAGTTTCAGGGCATCCTTCGGGCAGTATCCCTTAGGAGC...

390 bp · TkA01G044380|TK1151|CDS

ATGAACCCCTTGGGGAGCTCTTTCCCACACGTATTAACAAGCAAGCTAAGTGAGATCGGGATATTAATGTTGATCCCAAGAACATTGGCTTTCAAAGCAGTACAAAGGCAGGCGGCGACTTCAATGTCAAGAAGGCCGCCAAGGGCTGAGCAACATGGGTGGTCCGGTGGGTTACCAATGACGGTTCCAATGGAGTCATTAAGCAACTTAGCACACACTCCCAGTTTCAGGGCATCCTTCGGGCAGTATCCCTTAGGAGC...

129 aa · TkA01G044380|TK1151|PROTEIN

MNPLGSSFPHVLTSKLSEIGILMLIPRTLAFKAVQRQAATSMSRRPPRAEQHGWSGGLPMTVPMESLSNLAHTPSFRASFGQYPLGAMGLWGRGTAGVWQVKHACDTAKKRMLIVRKRVEDLLKAIGAN

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G044380
TK1151 IDTkA01G044380
OH-1004 IDLXL04_005322
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)45.500
Protein coverage (%)TK1151 93.798 / OH-1004 43.223
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G044380
LocationChr01:11476995-11477384 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_005322 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009704 de-etiolation Biological Process
GO:0045036 protein targeting to chloroplast Biological Process
GO:1904216 positive regulation of protein import into chloroplast stroma Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0009536 plastid Cellular Component
GO:0009707 chloroplast outer membrane Cellular Component
GO:0009941 chloroplast envelope Cellular Component
GO:0010006 Toc complex Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT4G32250
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.906
Rank 1 · TkA01G044380 · TK1151
Cytoplasm0.075
Rank 2 · TkA01G044380 · TK1151
Nucleus0.071
Rank 3 · TkA01G044380 · TK1151
Cell membrane0.026
Rank 4 · TkA01G044380 · TK1151
Plastid0.020
Rank 5 · TkA01G044380 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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