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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA01G033540
Reference: TK1151 Chr: Chr01 Coordinates: 8728389-8733974 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2953 bp · TkA01G033540|TK1151|cDNA

CAAGTACACAAGGCGGGAATAGAATGCAAAACCTAGAAAATGAAATCCTCATAAAAGATTTTTTATTTTGAAAAAGCAAAAGAAACAAAGCCAAAGAAGAACCAGCAGGCCAACAGGGTCATCTATCTCCTTTTCCATTTCTTCCAATCCAAAACTCAGAAAAACCAGCTTGAATCTGTGCTTACATTTGGTGGATCCACCTTCAAAGCTTCAAATGACAGTAAATTTAGAACATAAACCCTTTCGCATGATGTTAATTT...

CDS

Download CDS FASTA

1461 bp · TkA01G033540|TK1151|CDS

ATGGATCTTCACCCAGGTACAAATGGAACTGCAAACAGCCAATCAGATGCTTTAAACAGCACAAATGGTGGCAATGGTGTTGTTCAAGATGGCAAACGTGTTCATTCTGCCAAAGTGCCAGAATTAACAAAACTAAACAGTTTAGAGAATGCATCTTCTCAGTCACTCTTCAAAATTTTGCATAAGATTCTTGATGACAGCATTGAGAACAAGAAAGAAGATGTACCAGATAGAGTCGCCAGTGTGTTAAAAAAGCTAAT...

Protein

Download Protein FASTA

486 aa · TkA01G033540|TK1151|PROTEIN

MDLHPGTNGTANSQSDALNSTNGGNGVVQDGKRVHSAKVPELTKLNSLENASSQSLFKILHKILDDSIENKKEDVPDRVASVLKKLIQMTEHQISKQADNFKKQKNIYKIREEKYQLKFKVLGTLVTGASEENKLINNQLQLIKSEKKKMEDIKKLEDVELIRLRKEKNDCNSEISKLKDEIEAIKDTYETKCMQLETHAIEVESELKKKVMDLENHLTGSRKKVKELEKFTESKFLRWKNKERGYINFMDFQHGSLKEL...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA01G033540
TK1151 IDTkA01G033540
OH-1004 IDLXL04_005569
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)93.200
Protein coverage (%)TK1151 96.914 / OH-1004 62.384
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA01G033540
LocationChr01:8728389-8733974 (-)
DescriptionSimilar to KIN14J: Kinesin-like protein KIN-14J
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g63640 Kinesin-like protein KIN-14J. No verified direct reference in this release
At5g41310 Kinesin-like protein KIN-14K. No verified direct reference in this release
At1g73860 Kinesin-like protein KIN-14P. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os01g0744000 Kinesin-like protein KIN-14C. No verified direct reference in this release
UniProt: Q0E2L3 Kinesin-like protein KIN-14D. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_005569 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007017 microtubule-based process Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0005634 nucleus Cellular Component
GO:0005874 microtubule Cellular Component
GO:0015630 microtubule cytoskeleton Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
KEGG gene cross-reference
ath:AT1G63640
ath:AT5G41310
dosa:Os01g0744000
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.642
Rank 1 · TkA01G033540 · TK1151
Nucleus0.214
Rank 2 · TkA01G033540 · TK1151
Golgi apparatus0.102
Rank 3 · TkA01G033540 · TK1151
Lysosome / Vacuole0.077
Rank 4 · TkA01G033540 · TK1151
Cell membrane0.067
Rank 5 · TkA01G033540 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF04216FdhE_N29-104 aa
PF11155DUF293530-71 aa
PF03179V-ATPase_G51-89 aa
PF17419MauJ53-95 aa
PF03179V-ATPase_G79-105 aa
PF11155DUF293581-106 aa
PF28496NEAP87-121 aa
PF16796Microtub_bd104-111 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA01G033540PF04216FdhE_N291040.1113.5
TkA01G033540PF11155DUF293530713.88.8
TkA01G033540PF03179V-ATPase_G51896.98.0
TkA01G033540PF17419MauJ53950.8811.0
TkA01G033540PF03179V-ATPase_G791056.98.0
TkA01G033540PF11155DUF2935811063.88.8
TkA01G033540PF28496NEAP871210.01915.8
TkA01G033540PF16796Microtub_bd1041117.9e-46156.5
TkA01G033540PF17419MauJ1131600.8811.0
TkA01G033540PF03179V-ATPase_G1412256.98.0
TkA01G033540PF28496NEAP1431610.01915.8
TkA01G033540PF02183HALZ1641810.2212.4
TkA01G033540PF00225Kinesin1651884e-41141.8
TkA01G033540PF14775NYD-SP28_assoc1741900.04814.5
TkA01G033540PF04508Pox_A_type_inc1741830.09113.4
TkA01G033540PF28496NEAP1952350.01915.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
B3H6Z8Arabidopsis thalianasp|B3H6Z8|KN14J_ARATH Kinesin-like protein KIN-14J56.500%Swiss-ProtHigh
F4JX00Arabidopsis thalianasp|F4JX00|KN14K_ARATH Kinesin-like protein KIN-14K50.900%Swiss-ProtHigh
Q0WN69Arabidopsis thalianasp|Q0WN69|KN14P_ARATH Kinesin-like protein KIN-14P41.300%Swiss-ProtMedium
Q5JKW1Oryza sativa subsp. japonicasp|Q5JKW1|KN14C_ORYSJ Kinesin-like protein KIN-14C52.200%Swiss-ProtHigh
Q0E2L3Oryza sativa subsp. japonicasp|Q0E2L3|KN14D_ORYSJ Kinesin-like protein KIN-14D48.900%Swiss-ProtMedium

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