Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2397 bp · LXL04_039895|LXL04_039895|OH1004|cDNA
ATGGAGGCTGCAAGGAAACAGTTCCTGAACGAATTCGGTGAATCGTACGGTTATCCGAATGCTCCAAAAACCATCGATGAAATCCGAGCTACTGAATTTAAACGAATTGATGGAAATGTGTACTTGGATCACGCTGGTGCAACTTTATATTCTGAATTACAGATGGAGGCGATATTTAAAGATCTTACCACCACTGTATACGGAAATCCTCATAGTCAAAGCAGCTCTAGCTTGACCTCATCAGACATTGTAGAAGATGC...
2397 bp · LXL04_039895|LXL04_039895|OH1004|CDS
ATGGAGGCTGCAAGGAAACAGTTCCTGAACGAATTCGGTGAATCGTACGGTTATCCGAATGCTCCAAAAACCATCGATGAAATCCGAGCTACTGAATTTAAACGAATTGATGGAAATGTGTACTTGGATCACGCTGGTGCAACTTTATATTCTGAATTACAGATGGAGGCGATATTTAAAGATCTTACCACCACTGTATACGGAAATCCTCATAGTCAAAGCAGCTCTAGCTTGACCTCATCAGACATTGTAGAAGATGC...
Protein
Download Protein FASTA798 aa · LXL04_039895|LXL04_039895|OH1004|PROTEIN
MEAARKQFLNEFGESYGYPNAPKTIDEIRATEFKRIDGNVYLDHAGATLYSELQMEAIFKDLTTTVYGNPHSQSSSSLTSSDIVEDARHQVLKICNASPKEYKCIFTSGATSALKLIGEAFPWTNESTFMYTIENHNSVLGIREYALNKGASALAIDFEETEKIGSNKSSIKVTQYPIQKRSETRVLEKEPTGDTYNLFAFPTECNFSGARFNLDLIDMIKEDSERVLEGSQHSRGCWMVLLDAAKGCSTDPPDLSKHKA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_039895 |
|---|---|
| TK1151 ID | TkA04G255340 |
| OH-1004 ID | LXL04_039895 |
| Relationship / confidence | Multi Candidate From Tk1151 / Complex relationship |
| Protein identity (%) | 98.900 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_039895 | ||||||
|---|---|---|---|---|---|---|---|
| Location | JAJTUU010000071.1:22068-29966 (+) | ||||||
| Description | Similar to FLACCA: Molybdenum cofactor sulfurase | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisRice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0006777 Mo-molybdopterin cofactor biosynthetic process Biological Process GO:0006970 response to osmotic stress Biological Process GO:0009408 response to heat Biological Process GO:0009409 response to cold Biological Process GO:0009651 response to salt stress Biological Process GO:0009688 abscisic acid biosynthetic process Biological Process GO:0009734 auxin-activated signaling pathway Biological Process GO:0009749 response to glucose Biological Process GO:0010118 stomatal movement Biological Process GO:0010182 sugar mediated signaling pathway Biological Process GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex Biological Process GO:0032787 monocarboxylic acid metabolic process Biological Process | ||||||
| KEGG gene cross-reference | ath:AT1G16540 dosa:Os06g0670000 sly:543832 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00266.26Aminotran_540-161 aaPF00266.26Aminotran_5234-482 aaPF03476.22MOSC_N516-634 aaPF03473.24MOSC662-794 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_039895 | PF00266.26 | Aminotran_5 | 40 | 161 | 9.2e-30 | 104.6 |
| LXL04_039895 | PF00266.26 | Aminotran_5 | 234 | 482 | 9.2e-30 | 104.6 |
| LXL04_039895 | PF03476.22 | MOSC_N | 516 | 634 | 1.2e-19 | 71.0 |
| LXL04_039895 | PF03473.24 | MOSC | 662 | 794 | 3.5e-24 | 85.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.