Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1194 bp · LXL04_037218|LXL04_037218|OH1004|cDNA
TTTTTTTGTCATTTGACAAATATAAAGTCTTTTACCACCATTGGTTTAGACAACCTATTAACAGAATTCAGTCAAGTGACTTCATTCAGAAAGATCAAACAGATGAATCTTACAAGCTTGGCGCGAGTCTCCTTTCTCTCAACTTCATtcacatcaagaacactcaatCGCTCCCTTGCTTACAGACCTATTTCTTGTTCATCACTTTCCCATACACCCACTTCACTAAACCCTAACCTCCCACTATTTCTCCGACCACC...
1182 bp · LXL04_037218|LXL04_037218|OH1004|CDS
TTGACAAATATAAAGTCTTTTACCACCATTGGTTTAGACAACCTATTAACAGAATTCAGTCAAGTGACTTCATTCAGAAAGATCAAACAGATGAATCTTACAAGCTTGGCGCGAGTCTCCTTTCTCTCAACTTCATTCACATCAAGAACACTCAATCGCTCCCTTGCTTACAGACCTATTTCTTGTTCATCACTTTCCCATACACCCACTTCACTAAACCCTAACCTCCCACTATTTCTCCGACCACCCACCTTCACCGC...
Protein
Download Protein FASTA393 aa · LXL04_037218|LXL04_037218|OH1004|PROTEIN
MTNIKSFTTIGLDNLLTEFSQVTSFRKIKQMNLTSLARVSFLSTSFTSRTLNRSLAYRPISCSSLSHTPTSLNPNLPLFLRPPTFTATVSDLKKWQNWAKSLALSVGSSFADSDNGPDSDILHRELNWLIEDTLESPKSLLLSEHDAVLTLRAELGDLYSLWKQRIEKRRPFQYIVGCEHWRDLVLSVEEGVLIPRPETELIIDLVDDAIKQNVELKNGMWVDLGTGSGALAIGIGRILGDSVRVTAIDLSPIAVQVASF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_037218 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_037218 |
|---|---|
| Location | Chr09:3050554-3052335 (-) |
| Description | Similar to prmC: Release factor glutamine methyltransferase (Thermosynechococcus elongatus (strain BP-1) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006415 translational termination Biological Process GO:0032259 methylation Biological Process GO:0003676 nucleic acid binding Molecular Function GO:0036009 protein-glutamine N-methyltransferase activity Molecular Function GO:0102559 peptide chain release factor N(5)-glutamine methyltransferase activity Molecular Function |
| KEGG gene cross-reference | gvi:glr1755 mta:Moth_2396 pma:Pro_0359 syn:sll1237 tel:tlr1836 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF06325.20PrmA199-295 aaPF05175.21MTS217-299 aaPF13847.13Methyltransf_31221-295 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_037218 | PF06325.20 | PrmA | 199 | 295 | 3.7e-08 | 33.9 |
| LXL04_037218 | PF05175.21 | MTS | 217 | 299 | 5.1e-08 | 33.4 |
| LXL04_037218 | PF13847.13 | Methyltransf_31 | 221 | 295 | 5.1e-06 | 27.0 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.