Gene Card
Gene overview
cDNA / CDS / Protein Sequences
744 bp · LXL04_037060|LXL04_037060|OH1004|cDNA
ATGGCGGAATCTGAAGCCAATCAAGCGACTGAGCCACTGGTACCGAGCGATGGCGGAGAGGATCATCTGAAGCATCTCGATTTTGTGCAAAGCGCGGTGATCTATTTCATTGTTTGCTTTTCGACCGTTTACGAATACGCCAAAGAGAACGCCGGTGCGTTGAAGCCTGGTTTACAAACAGTCGAAAGCACCGTTAAAACTATCACCGGACCGGTTTGCGAGAGGTTTCATGACGTTCCTTATGAGCTCCTAAAGTTCCT...
744 bp · LXL04_037060|LXL04_037060|OH1004|CDS
ATGGCGGAATCTGAAGCCAATCAAGCGACTGAGCCACTGGTACCGAGCGATGGCGGAGAGGATCATCTGAAGCATCTCGATTTTGTGCAAAGCGCGGTGATCTATTTCATTGTTTGCTTTTCGACCGTTTACGAATACGCCAAAGAGAACGCCGGTGCGTTGAAGCCTGGTTTACAAACAGTCGAAAGCACCGTTAAAACTATCACCGGACCGGTTTGCGAGAGGTTTCATGACGTTCCTTATGAGCTCCTAAAGTTCCT...
Protein
Download Protein FASTA247 aa · LXL04_037060|LXL04_037060|OH1004|PROTEIN
MAESEANQATEPLVPSDGGEDHLKHLDFVQSAVIYFIVCFSTVYEYAKENAGALKPGLQTVESTVKTITGPVCERFHDVPYELLKFLDLKVDDALKELNRHVPSLMKQAPSQAKYVAHNFPEVARDVALEAFRMARATAKKLYIKYEPTAKELYKSYEPVAEKYAVQAWRSLNKLPVFPQVAQVAVPTAAFMAEKYNVGVCYTAEKGYPVAEYLPLIPIEKIAKVFQEDQDQHVATGGQGQAIHVDT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_037060 |
|---|---|
| TK1151 ID | TkA04G007290 |
| OH-1004 ID | LXL04_037060 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 58.730 / OH-1004 29.960Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_037060 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:52478162-52479566 (-) | |||||||||
| Description | Similar to SRP: Stress-related protein | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0019915 lipid storage Biological Process GO:0034389 lipid droplet organization Biological Process GO:0045927 positive regulation of growth Biological Process GO:0080186 developmental vegetative growth Biological Process GO:1902584 positive regulation of response to water deprivation Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005811 lipid droplet Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT2G47780 ath:AT3G05500 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF05755.18REF20-227 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_037060 | PF05755.18 | REF | 20 | 227 | 1.1e-82 | 277.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.