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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_035876
Reference: OH-1004 Chr: Chr08 Coordinates: 31096775-31098409 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

588 bp · LXL04_035876|LXL04_035876|OH1004|cDNA

ATGGGGAGCGAAATGAAGAGCCATTGCATTGACGATGACATACTCACCGTTATATGGACGGCGGAGCAAGTCTATCAGAAAGTTTGCGAATTGGCTTCCCAAATCAACCATGAATTCTCTCCTCCAGGCTCATCGTGTCCGGTGGTCGTTGGTGTTGCTACCGGAGCCTTTCTCTTCCTCGCCGACCTCGTCCGCAACATCAAATTGCCTGTCACTGTGGATTTTATTCGAGCTGAATCTTATGGCTCTGGAACTGTTTC...

588 bp · LXL04_035876|LXL04_035876|OH1004|CDS

ATGGGGAGCGAAATGAAGAGCCATTGCATTGACGATGACATACTCACCGTTATATGGACGGCGGAGCAAGTCTATCAGAAAGTTTGCGAATTGGCTTCCCAAATCAACCATGAATTCTCTCCTCCAGGCTCATCGTGTCCGGTGGTCGTTGGTGTTGCTACCGGAGCCTTTCTCTTCCTCGCCGACCTCGTCCGCAACATCAAATTGCCTGTCACTGTGGATTTTATTCGAGCTGAATCTTATGGCTCTGGAACTGTTTC...

195 aa · LXL04_035876|LXL04_035876|OH1004|PROTEIN

MGSEMKSHCIDDDILTVIWTAEQVYQKVCELASQINHEFSPPGSSCPVVVGVATGAFLFLADLVRNIKLPVTVDFIRAESYGSGTVSNGAPRISSGLKLDVVGKHVILVEDIVDTGNTVSRLISYLEGKGATSVSVCTLLDKPSRRKVHFKLLGDGKFYSGFECPDSFVVGYGLDFNERYRNLPYIGVLKPEIYE

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_035876
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_035876
LocationChr08:31096775-31098409 (+)
DescriptionSimilar to hpt: Hypoxanthine-guanine phosphoribosyltransferase (Enterococcus faecalis (strain ATCC 700802 / V583)
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_035876 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006166 purine ribonucleoside salvage Biological Process
GO:0006178 guanine salvage Biological Process
GO:0032263 GMP salvage Biological Process
GO:0032264 IMP salvage Biological Process
GO:0046100 hypoxanthine metabolic process Biological Process
GO:0005829 cytosol Cellular Component
GO:0000166 nucleotide binding Molecular Function
GO:0000287 magnesium ion binding Molecular Function
GO:0004422 hypoxanthine phosphoribosyltransferase activity Molecular Function
GO:0052657 guanine phosphoribosyltransferase activity Molecular Function
KEGG gene cross-reference
efa:EF0264
hin:HI_1153
sfl:SF0122
sfx:S0124
stm:STM0170
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.740
Rank 1 · LXL04_035876 · OH-1004
Nucleus0.512
Rank 2 · LXL04_035876 · OH-1004
Mitochondrion0.061
Rank 3 · LXL04_035876 · OH-1004
Cell membrane0.037
Rank 4 · LXL04_035876 · OH-1004
Peroxisome0.034
Rank 5 · LXL04_035876 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00156.34Pribosyltran22-176 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_035876PF00156.34Pribosyltran221762.7e-2795.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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