Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1716 bp · LXL04_034122|LXL04_034122|OH1004|cDNA
ATGCGTGTAGAGAATGGGAGAAGGCGTGCAAGCGTGCAGAGACATCGAGCTATCCGAGTATGGGAGAGAGCATGCGTGCAGGGACGGGACGATCCGATATGGGGCGGTGAGCATGTCAGACCCAAGCACGTGACTTTAGGTTTTATGACGTATTTAAATATCTTAACTGAGCGGATCATGAATTTCAATGACATTACAATGATATCCGACTTAAATCCAAATATGGAGGATTATACACTCAAGGTTACAATTATCCGTAT...
1716 bp · LXL04_034122|LXL04_034122|OH1004|CDS
ATGCGTGTAGAGAATGGGAGAAGGCGTGCAAGCGTGCAGAGACATCGAGCTATCCGAGTATGGGAGAGAGCATGCGTGCAGGGACGGGACGATCCGATATGGGGCGGTGAGCATGTCAGACCCAAGCACGTGACTTTAGGTTTTATGACGTATTTAAATATCTTAACTGAGCGGATCATGAATTTCAATGACATTACAATGATATCCGACTTAAATCCAAATATGGAGGATTATACACTCAAGGTTACAATTATCCGTAT...
Protein
Download Protein FASTA571 aa · LXL04_034122|LXL04_034122|OH1004|PROTEIN
MRVENGRRRASVQRHRAIRVWERACVQGRDDPIWGGEHVRPKHVTLGFMTYLNILTERIMNFNDITMISDLNPNMEDYTLKVTIIRIWKFTSWGNPNDVRGFGMVLIDEKWTVNMEIIVELEKIESKKTLSEQGEYEDSVSLSMTETASQFTVNLKDSNSFTDDNTPISDKMDGTCTSPLTKTSTSRLKSPTKVAKCKLIEEYDLDEPVAESATKPVDNSNTKSFINGEHKLLIPKLEKYSSLYCNLIKKIGFDFNSTSK...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_034122 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_034122 |
|---|---|
| Location | Chr07:83241086-83249185 (+) |
| Description | Similar to PIF1: ATP-dependent DNA helicase PIF1 (Saccharomyces cerevisiae (strain YJM789) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000722 telomere maintenance via recombination Biological Process GO:0000723 telomere maintenance Biological Process GO:0000727 double-strand break repair via break-induced replication Biological Process GO:0006260 DNA replication Biological Process GO:0006281 DNA repair Biological Process GO:0006310 DNA recombination Biological Process GO:0019985 translesion synthesis Biological Process GO:0031297 replication fork processing Biological Process GO:0032211 negative regulation of telomere maintenance via telomerase Biological Process GO:0043504 mitochondrial DNA repair Biological Process GO:0051276 chromosome organization Biological Process GO:0071932 replication fork reversal Biological Process |
| KEGG gene cross-reference | ani:ANIA_06895 cal:CAALFM_CR07360WA sce:YML061C spo:2541213 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.