Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1338 bp · LXL04_033455|LXL04_033455|OH1004|cDNA
CATTATATAGATACTCTTCGTTTTTCTGCTGTGCCGAATGGACAATATTTACCCGCGATAACCTTTCTACGAAGTCATCATCTGCTTGCGATTATAAATAGAACGCTAAATTGGACACCattccctatatatatatataccccaCCTCATCTCCGGCAATCTCACTTCTTATTTTCAATCTTCATAGCTATGACGAACATGAACATCACCCCACATGTCATTACCTGTAAAGCGGCGGTGGTACGGGAGGTGGGCGGAGC...
1257 bp · LXL04_033455|LXL04_033455|OH1004|CDS
CTGCTTGCGATTATAAATAGAACGCTAAATTGGACACCATTCCCTATATATATATATACCCCACCTCATCTCCGGCAATCTCACTTCTTATTTTCAATCTTCATAGCTATGACGAACATGAACATCACCCCACATGTCATTACCTGTAAAGCGGCGGTGGTACGGGAGGTGGGCGGAGCAATCACGGTGGAGGAGATAAAAGTCGATCCACCGAAAGCATCAGAAGTTAGAATTAAGATGCTGTGTGCGAGTATATGCCA...
Protein
Download Protein FASTA418 aa · LXL04_033455|LXL04_033455|OH1004|PROTEIN
MLAIINRTLNWTPFPIYIYTPPHLRQSHFLFSIFIAMTNMNITPHVITCKAAVVREVGGAITVEEIKVDPPKASEVRIKMLCASICHTDILCCNGIPLPLFPRIPGHEGVGVVESVGEDVTAEVNPGDVVMPLYMGECGGCLNCKSGRTNICHVYPIDGFTGLMSDGTSRMSVAATGEAIYHHFSCSTWSEYMVINVNYVIKVDPKMSLPHASLLSCGFTTGLGAPWKEAPVTAGSSVAVFGLGVVGLGAIKGAQMQGAS...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_033455 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_033455 |
|---|---|
| Location | Chr07:44228053-44231520 (+) |
| Description | Similar to ADH1: Alcohol dehydrogenase 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0008299 isoprenoid biosynthetic process Biological Process GO:0009753 response to jasmonic acid Biological Process GO:0009820 alkaloid metabolic process Biological Process GO:0035834 indole alkaloid metabolic process Biological Process GO:0046294 formaldehyde catabolic process Biological Process GO:0005634 nucleus Cellular Component GO:0005829 cytosol Cellular Component GO:0008270 zinc ion binding Molecular Function GO:0018457 perillyl-alcohol dehydrogenase (NAD+) activity Molecular Function GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity Molecular Function GO:0102311 8-hydroxygeraniol dehydrogenase activity Molecular Function |
| KEGG gene cross-reference | No functional description available |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08240.18ADH_N73-203 aaPF00107.33ADH_zinc_N246-372 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_033455 | PF08240.18 | ADH_N | 73 | 203 | 1.2e-19 | 71.2 |
| LXL04_033455 | PF00107.33 | ADH_zinc_N | 246 | 372 | 3e-24 | 86.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.