Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1485 bp · LXL04_032526|LXL04_032526|OH1004|cDNA
ATGAACGAAAACGGACAGGAGTCGTCTCTTTCGGATTTTGAAGCCGCTCGGAGTAATCTTCGTCAGCGTTGGGAGTTGGCTTCTGTTCTCAATTTCTTCAAGGTGTTTGAGCCTGTTATAGAAAGCAATCTGAAGATTTCTGCTGAAGAGATTGAGACTTCACTCATTCAACCAAACAAATCTCTTGCTCAGATTCACATAGCACTCTTAAAGGGAATCCCGCCTGTAAATAAAAACCTAAAAGATCCAGATGCATGGGT...
1485 bp · LXL04_032526|LXL04_032526|OH1004|CDS
ATGAACGAAAACGGACAGGAGTCGTCTCTTTCGGATTTTGAAGCCGCTCGGAGTAATCTTCGTCAGCGTTGGGAGTTGGCTTCTGTTCTCAATTTCTTCAAGGTGTTTGAGCCTGTTATAGAAAGCAATCTGAAGATTTCTGCTGAAGAGATTGAGACTTCACTCATTCAACCAAACAAATCTCTTGCTCAGATTCACATAGCACTCTTAAAGGGAATCCCGCCTGTAAATAAAAACCTAAAAGATCCAGATGCATGGGT...
Protein
Download Protein FASTA494 aa · LXL04_032526|LXL04_032526|OH1004|PROTEIN
MNENGQESSLSDFEAARSNLRQRWELASVLNFFKVFEPVIESNLKISAEEIETSLIQPNKSLAQIHIALLKGIPPVNKNLKDPDAWVVSLSKKLIMWWPWVAEGDFPLTADKGAEMATYKKLDPTIRLVVLKALCEIRADQHDVVSYINEGVKTKNEMSTFRKTNIGEDGKGTSYWCDGNEVIGFRLYKEFNTFKKNAISCQWETLATNLEEFQIVVDEYSSSKSKLEVAVSVAVENEVMPALNKLEKKRQKALQKKMHE...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_032526 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_032526 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr07:24750295-24753917 (-) | ||||||
| Description | Similar to DDR4: DDT domain-containing protein DDR4 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0006351 DNA-templated transcription Biological Process GO:0006355 regulation of DNA-templated transcription Biological Process GO:0007156 homophilic cell-cell adhesion Biological Process GO:0031507 heterochromatin formation Biological Process GO:0005576 extracellular region Cellular Component GO:0005634 nucleus Cellular Component GO:0016020 membrane Cellular Component GO:0031010 ISWI-type complex Cellular Component GO:0031213 RSF complex Cellular Component GO:0005509 calcium ion binding Molecular Function GO:0030246 carbohydrate binding Molecular Function GO:0042393 histone binding Molecular Function | ||||||
| KEGG gene cross-reference | ath:AT1G18950 hwa:HQ_1081A These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
F4IDY7 | Arabidopsis thaliana | DDT domain-containing protein DDR4 | 43.689% | Swiss-Prot | moderate database homology |