Gene Card
Gene overview
cDNA / CDS / Protein Sequences
2934 bp · LXL04_031909|LXL04_031909|OH1004|cDNA
ATGCCATTACGTGAAGTCTACGGCCTCAATGTTGAAGATTTGGTCACCATTATTGATAAAATGAACAAGTCTGTTGTTCCTTACTTTCAAATAGGGGTGGGTGTCCACGGCTTCAAATATGAAGAGAAAGAGATTAAAACGGAGCAGGGTAAGTTGGCTCTATTCGAAAGATGGAGGAGCCACCACAAGATGGAGAAAATAAGCGAGAAAGCAAAAAAGCTGCAGTACAACAACTTCAAGGCTAACCTAGAACATGTTCA...
2934 bp · LXL04_031909|LXL04_031909|OH1004|CDS
ATGCCATTACGTGAAGTCTACGGCCTCAATGTTGAAGATTTGGTCACCATTATTGATAAAATGAACAAGTCTGTTGTTCCTTACTTTCAAATAGGGGTGGGTGTCCACGGCTTCAAATATGAAGAGAAAGAGATTAAAACGGAGCAGGGTAAGTTGGCTCTATTCGAAAGATGGAGGAGCCACCACAAGATGGAGAAAATAAGCGAGAAAGCAAAAAAGCTGCAGTACAACAACTTCAAGGCTAACCTAGAACATGTTCA...
Protein
Download Protein FASTA977 aa · LXL04_031909|LXL04_031909|OH1004|PROTEIN
MPLREVYGLNVEDLVTIIDKMNKSVVPYFQIGVGVHGFKYEEKEIKTEQGKLALFERWRSHHKMEKISEKAKKLQYNNFKANLEHVHNTNKASKPYKLEMNRFAGMNIGEFRSKHTGLKAAPPPRRPRNMLRGCAPGGGCCPPNDGGCCAPPDGGCCPPGGGCCAPSGGGCCAPSGGAVEVVVHPTEAVVHPEEAVVHQAVEVVVRQMVEAVVRQAAEAVVHQTTEVVVLQVVEVVVHQKTEVVAHQAEEDVVHQKTEPV...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_031909 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_031909 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:13071756-13076732 (-) | |||||||||
| Description | Similar to CEP1: KDEL-tailed cysteine endopeptidase CEP1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006508 proteolysis Biological Process GO:0009555 pollen development Biological Process GO:0009626 plant-type hypersensitive response Biological Process GO:0010623 programmed cell death involved in cell development Biological Process GO:0048658 anther wall tapetum development Biological Process GO:0050832 defense response to fungus Biological Process GO:0051603 proteolysis involved in protein catabolic process Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005576 extracellular region Cellular Component GO:0005615 extracellular space Cellular Component GO:0005764 lysosome Cellular Component GO:0005783 endoplasmic reticulum Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT5G50260 rcu:8278243 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF08246.18Inhibitor_I2955-111 aaPF00112.30Peptidase_C1742-955 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_031909 | PF08246.18 | Inhibitor_I29 | 55 | 111 | 9.2e-09 | 36.2 |
| LXL04_031909 | PF00112.30 | Peptidase_C1 | 742 | 955 | 3.2e-69 | 234.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.