Gene Card
Gene overview
cDNA / CDS / Protein Sequences
717 bp · LXL04_031791|LXL04_031791|OH1004|cDNA
ATGATCCCCGCTCAGAACAACGAATCTATACGCAACTCAGGTGTTGGTGGGGTATGCATGATGAGTACCAAATGGAGAGATGAACAGCATTCATCCTTCATAAACTTTATATCCAGCTTCCTGACTGCAAATTCCTTCAAGTTAAACCCTGTGCCAATTGCACCTGATTTCATTTTCAACTGTGGAGGGTTATCAGTTGCTTTTATTTTCGTCATAAATTACGACTGCAACAATCCTGAACCTATTTTTAGCAGAGCTCA...
717 bp · LXL04_031791|LXL04_031791|OH1004|CDS
ATGATCCCCGCTCAGAACAACGAATCTATACGCAACTCAGGTGTTGGTGGGGTATGCATGATGAGTACCAAATGGAGAGATGAACAGCATTCATCCTTCATAAACTTTATATCCAGCTTCCTGACTGCAAATTCCTTCAAGTTAAACCCTGTGCCAATTGCACCTGATTTCATTTTCAACTGTGGAGGGTTATCAGTTGCTTTTATTTTCGTCATAAATTACGACTGCAACAATCCTGAACCTATTTTTAGCAGAGCTCA...
Protein
Download Protein FASTA238 aa · LXL04_031791|LXL04_031791|OH1004|PROTEIN
MIPAQNNESIRNSGVGGVCMMSTKWRDEQHSSFINFISSFLTANSFKLNPVPIAPDFIFNCGGLSVAFIFVINYDCNNPEPIFSRAQKLKTQFAHLYVVIILPLKEQNDFFIQSYFRYGVDIGRPTFVPALDLEMGFEKIVRIAVLRGVCKRQDVVSKLKVERERLVQSTDVFLKVVSSIPRVAPHDANALQSIGSIEGIAKASKENLLENTDMSSEKADMIQRFFRDPKVYLSPKIS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_031791 |
|---|---|
| TK1151 ID | TkA08G130460 |
| OH-1004 ID | LXL04_031791 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 99.582 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_031791 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:11413438-11415412 (-) | ||||||||||||
| Description | Similar to PTD: Protein PARTING DANCERS homolog | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0000712 resolution of meiotic recombination intermediates Biological Process GO:0007059 chromosome segregation Biological Process GO:0007131 reciprocal meiotic recombination Biological Process GO:0007140 male meiotic nuclear division Biological Process GO:0009555 pollen development Biological Process GO:0010845 positive regulation of reciprocal meiotic recombination Biological Process GO:0048236 plant-type sporogenesis Biological Process GO:0005634 nucleus Cellular Component GO:0005694 chromosome Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component | ||||||||||||
| KEGG gene cross-reference | ath:AT1G12790 dosa:Os05g0588200 osa:4339770 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.