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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_031664
Reference: OH-1004 Chr: Chr07 Coordinates: 9317046-9318395 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

642 bp · LXL04_031664|LXL04_031664|OH1004|cDNA

ATGGTTGCTGCTTGCTTAGTGAAAGATCCAAAAAATTGCCCCTCTTCGGAAAAGCTCTTGAAGCACCCGCTCTTTAAGCATGCAAAAACATGTGATTATTTGGAACGTACTATTCTTGATGGTCTTTCTCCATTAGGTGATCGTTTTATGATGCTAAAGgCCAAAGAAGATGATTTTCTTGTACAGAACAAGGACCTATATAGAGATAAGGACCATTTATCTCAGTATATACATGGAATTAGTGCATGGAACTTTAACTT...

642 bp · LXL04_031664|LXL04_031664|OH1004|CDS

ATGGTTGCTGCTTGCTTAGTGAAAGATCCAAAAAATTGCCCCTCTTCGGAAAAGCTCTTGAAGCACCCGCTCTTTAAGCATGCAAAAACATGTGATTATTTGGAACGTACTATTCTTGATGGTCTTTCTCCATTAGGTGATCGTTTTATGATGCTAAAGGCCAAAGAAGATGATTTTCTTGTACAGAACAAGGACCTATATAGAGATAAGGACCATTTATCTCAGTATATACATGGAATTAGTGCATGGAACTTTAACTT...

213 aa · LXL04_031664|LXL04_031664|OH1004|PROTEIN

MVAACLVKDPKNCPSSEKLLKHPLFKHAKTCDYLERTILDGLSPLGDRFMMLKAKEDDFLVQNKDLYRDKDHLSQYIHGISAWNFNLEDLKNQAALLNDLDEISSVEDPKTTEQQNGVNGVTVTVTSPQEKVSPEIHNDNHSDAKTGRSTCINEIRGENGYLSQMISPTLRERELHSQVIRLQQSGENSSRDLTELSEHYETKVNELITELEH

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_031664
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_031664
LocationChr07:9317046-9318395 (+)
DescriptionSimilar to fray2: Serine/threonine-protein kinase fray2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g14480 Ser/Thr protein kinase mediating a primary step for phototropin signaling in guard cells. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_031664 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006611 protein export from nucleus Biological Process
GO:1902456 regulation of stomatal opening Biological Process
GO:0005634 nucleus Cellular Component
GO:0005829 cytosol Cellular Component
GO:1902554 serine/threonine protein kinase complex Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0043539 protein serine/threonine kinase activator activity Molecular Function
GO:0046872 metal ion binding Molecular Function
GO:0106310 protein serine kinase activity Molecular Function
KEGG gene cross-reference
ath:AT4G14480
ddi:DDB_G0276577
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.642
Rank 1 · LXL04_031664 · OH-1004
Nucleus0.248
Rank 2 · LXL04_031664 · OH-1004
Cell membrane0.128
Rank 3 · LXL04_031664 · OH-1004
Golgi apparatus0.088
Rank 4 · LXL04_031664 · OH-1004
Mitochondrion0.054
Rank 5 · LXL04_031664 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O23304Arabidopsis thalianaSerine/threonine-protein kinase BLUS134.737%Swiss-Protweak database homology

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