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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_030982
Reference: OH-1004 Chr: Chr06 Coordinates: 126208520-126211310 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

486 bp · LXL04_030982|LXL04_030982|OH1004|cDNA

ATGCTGCCAATTGGGGGAGGTGCCCGAAGAAAAGAAAGATCATTCTCGCTATCCTATATTGTTTTGCTTGGTAGTTTCAAAAGCATTCGGCCCTCAGTGAGCAAGACGGCGGATGACATTGCTACTTTGATGTTCAATTGGGTTTGCCATAGGGATCTGAAAGTAGAGAAGAAGATTGTGGAGTTAGATGGATTACTGCATCATATTGCTCTTGAAGTACTAGAAGGAGAGCATTTTAAGGAGATGATTGCTGAAATAAT...

486 bp · LXL04_030982|LXL04_030982|OH1004|CDS

ATGCTGCCAATTGGGGGAGGTGCCCGAAGAAAAGAAAGATCATTCTCGCTATCCTATATTGTTTTGCTTGGTAGTTTCAAAAGCATTCGGCCCTCAGTGAGCAAGACGGCGGATGACATTGCTACTTTGATGTTCAATTGGGTTTGCCATAGGGATCTGAAAGTAGAGAAGAAGATTGTGGAGTTAGATGGATTACTGCATCATATTGCTCTTGAAGTACTAGAAGGAGAGCATTTTAAGGAGATGATTGCTGAAATAAT...

161 aa · LXL04_030982|LXL04_030982|OH1004|PROTEIN

MLPIGGGARRKERSFSLSYIVLLGSFKSIRPSVSKTADDIATLMFNWVCHRDLKVEKKIVELDGLLHHIALEVLEGEHFKEMIAEIIMQKMKEETAQVKVGVPIGDLWKAMTDLRHIAPKVLPDIVEKVELLEGDGGQGSILLFHFVLTTWVVLMIRCDYY

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_030982
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_030982
LocationChr06:126208520-126211310 (-)
DescriptionSimilar to CSBP: Phytohormone-binding protein CSBP
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_030982 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009740 gibberellic acid mediated signaling pathway Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0004864 protein phosphatase inhibitor activity Molecular Function
GO:0010331 gibberellin binding Molecular Function
GO:0010427 abscisic acid binding Molecular Function
GO:0038023 signaling receptor activity Molecular Function
GO:0044373 cytokinin binding Molecular Function
KEGG gene cross-reference
mtr:11418550
vra:106755646
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.326
Rank 1 · LXL04_030982 · OH-1004
Nucleus0.220
Rank 2 · LXL04_030982 · OH-1004
Endoplasmic reticulum0.182
Rank 3 · LXL04_030982 · OH-1004
Mitochondrion0.180
Rank 4 · LXL04_030982 · OH-1004
Cell membrane0.115
Rank 5 · LXL04_030982 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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