Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1029 bp · LXL04_028850|LXL04_028850|OH1004|cDNA
ATGGGATCTTCACAGGGTTCTTCTCTGTCCACAAATGTGGCAGGGTTGGTTGAGGGTTCTGCTAACGGGAGAGAGGTTGCTTATTTGGATACATTGCCTGTGTATGTCAAGGAACTAATAGCCGGAGGTGCTGCTGGAGCTTTTGCTAAAACCACTGTTGCTCCATTAGAAAGGATTAAGATCTTACTGCAGACACGAACTCATGGTTTTCATTCTCTTGGCGTCTATCAGTCGCTCAAAAGGCTACTAAAGCATGAAGG...
1029 bp · LXL04_028850|LXL04_028850|OH1004|CDS
ATGGGATCTTCACAGGGTTCTTCTCTGTCCACAAATGTGGCAGGGTTGGTTGAGGGTTCTGCTAACGGGAGAGAGGTTGCTTATTTGGATACATTGCCTGTGTATGTCAAGGAACTAATAGCCGGAGGTGCTGCTGGAGCTTTTGCTAAAACCACTGTTGCTCCATTAGAAAGGATTAAGATCTTACTGCAGACACGAACTCATGGTTTTCATTCTCTTGGCGTCTATCAGTCGCTCAAAAGGCTACTAAAGCATGAAGG...
Protein
Download Protein FASTA342 aa · LXL04_028850|LXL04_028850|OH1004|PROTEIN
MGSSQGSSLSTNVAGLVEGSANGREVAYLDTLPVYVKELIAGGAAGAFAKTTVAPLERIKILLQTRTHGFHSLGVYQSLKRLLKHEGLPGFYKGNGASVLRIVPYAALHFMTYEQYRCWVLDNYSGSLGTGPVVDLLAGSAAGGTAVLCTYPLDLARTKLAYQVVDAKESLGNGGKSIVGAQARYSGIRNVLQSVYTEGGMRGLYRGVGPTLIGILPYAGLKFYIYEELKRHVSEEHQRSIMMRLCCGALAGLLGQTFTY...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_028850 |
|---|---|
| TK1151 ID | TkA07G230700 |
| OH-1004 ID | LXL04_028850 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.400 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_028850 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:70788810-70791168 (-) | |||||||||
| Description | Similar to COAC1: Mitochondrial carrier protein CoAc1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:1990559 mitochondrial coenzyme A transmembrane transport Biological Process GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0015228 coenzyme A transmembrane transporter activity Molecular Function GO:0022857 transmembrane transporter activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G14560 ath:AT4G26180 bta:282524 zma:100191354 zma:100193242 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00153.33Mito_carr35-121 aaPF00153.33Mito_carr132-235 aaPF00153.33Mito_carr239-332 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_028850 | PF00153.33 | Mito_carr | 35 | 121 | 3.3e-71 | 235.8 |
| LXL04_028850 | PF00153.33 | Mito_carr | 132 | 235 | 3.3e-71 | 235.8 |
| LXL04_028850 | PF00153.33 | Mito_carr | 239 | 332 | 3.3e-71 | 235.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.