Gene Card
Gene overview
cDNA / CDS / Protein Sequences
873 bp · LXL04_027660|LXL04_027660|OH1004|cDNA
ATGTCACAAAGCAACAACATGAACCCATTGGATCATGTAGAATTCAGGAGGCAAGGCCATATGATTATAGATTTTCTTGCTGATTATTACAAAAATATCAACAATTACCCTGTTCTAAGCCAAGTCAATCCCGGTAATTTACAAAAAAAGTTGCCTGAATGTGCCCCATTGCTCCCTGAGTCAATTGAAACTATACTAAATGATATCAATAAGGATATTATTCCAGGCATAACACATTGGCAAAGTCCAAACTTTTTTGC...
873 bp · LXL04_027660|LXL04_027660|OH1004|CDS
ATGTCACAAAGCAACAACATGAACCCATTGGATCATGTAGAATTCAGGAGGCAAGGCCATATGATTATAGATTTTCTTGCTGATTATTACAAAAATATCAACAATTACCCTGTTCTAAGCCAAGTCAATCCCGGTAATTTACAAAAAAAGTTGCCTGAATGTGCCCCATTGCTCCCTGAGTCAATTGAAACTATACTAAATGATATCAATAAGGATATTATTCCAGGCATAACACATTGGCAAAGTCCAAACTTTTTTGC...
Protein
Download Protein FASTA290 aa · LXL04_027660|LXL04_027660|OH1004|PROTEIN
MSQSNNMNPLDHVEFRRQGHMIIDFLADYYKNINNYPVLSQVNPGNLQKKLPECAPLLPESIETILNDINKDIIPGITHWQSPNFFAYFASSGSTASFLGEMVINGFNVVGFNWLSSPASTELEMVVMDWLSKLLQLPRSLSFSGSGGGVLLGTTCEAFICTLLAAKEKMLDQIGREKTDKLVVYCSDQTHVGLQKAAKIVGIKQENVRQVLTAKSTNYKLSPERLDEVIKKDIEVGLIPLYLCATVGTTSTTTMLLTIF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_027660 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_027660 |
|---|---|
| Location | Chr06:21381921-21384590 (-) |
| Description | Similar to TYDC3: Tyrosine/DOPA decarboxylase 3 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006520 amino acid metabolic process Biological Process GO:0009821 alkaloid biosynthetic process Biological Process GO:0019752 carboxylic acid metabolic process Biological Process GO:0042444 phenylethylamine biosynthetic process Biological Process GO:1901695 tyramine biosynthetic process Biological Process GO:1903184 L-dopa metabolic process Biological Process GO:0005737 cytoplasm Cellular Component GO:0004837 tyrosine decarboxylase activity Molecular Function GO:0030170 pyridoxal phosphate binding Molecular Function GO:0036467 5-hydroxy-L-tryptophan decarboxylase activity Molecular Function GO:0036468 L-dopa decarboxylase activity Molecular Function |
| KEGG gene cross-reference | No functional description available |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00282.26Pyridoxal_deC44-252 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_027660 | PF00282.26 | Pyridoxal_deC | 44 | 252 | 1e-50 | 173.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.