Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1077 bp · LXL04_026801|LXL04_026801|OH1004|cDNA
ATGGCTAATCCGCAATCCATTTCGGATCCTTACGAACACCTCAATATTACACAAAACCCTGATGGGTCATTGACCCGACTCAACCAGGTTCCAACCATACATGCCACACCAGAACTCACAACTGATTCCCAACTTGCTCTGTCCAAAGACATACCACTTAACACCACCAACGCCACCTTCATCCGCCTATTCCGCCCCGTGTCACCACCACCAACAACCACTAAGAACCTCCCAATCATTATCTTCTTCCATGGTGGTGG...
1077 bp · LXL04_026801|LXL04_026801|OH1004|CDS
ATGGCTAATCCGCAATCCATTTCGGATCCTTACGAACACCTCAATATTACACAAAACCCTGATGGGTCATTGACCCGACTCAACCAGGTTCCAACCATACATGCCACACCAGAACTCACAACTGATTCCCAACTTGCTCTGTCCAAAGACATACCACTTAACACCACCAACGCCACCTTCATCCGCCTATTCCGCCCCGTGTCACCACCACCAACAACCACTAAGAACCTCCCAATCATTATCTTCTTCCATGGTGGTGG...
Protein
Download Protein FASTA358 aa · LXL04_026801|LXL04_026801|OH1004|PROTEIN
MANPQSISDPYEHLNITQNPDGSLTRLNQVPTIHATPELTTDSQLALSKDIPLNTTNATFIRLFRPVSPPPTTTKNLPIIIFFHGGGFILFSATSLPFHNSCAAISAQSLAIVISVEYRLAPEHRLPAAYDDAMDAMLWVRDQALGINGRDEWLAEHADFSKVYLMGSSAGGNIVYNAGLRALDIDLSPINIIGLIMNEAFFGGIERTESELRLANDHIVPLTVCDLMWSLALPKGSYSGDPLVDRQKEFANMLEAHGVH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_026801 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_026801 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr06:3067132-3068566 (-) | |||||||||
| Description | Similar to CXE8: Probable carboxylesterase 8 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009820 alkaloid metabolic process Biological Process GO:1901600 strigolactone metabolic process Biological Process GO:2000032 regulation of secondary shoot formation Biological Process GO:0005634 nucleus Cellular Component GO:0016787 hydrolase activity Molecular Function GO:0043722 4-hydroxyphenylacetate decarboxylase activity Molecular Function GO:0106435 carboxylesterase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ag:AFB74618 ath:AT2G45600 ath:AT5G62180 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF20434.6BD-FAE70-181 aaPF10340.16Say1_Mug18075-177 aaPF07859.20Abhydrolase_380-235 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_026801 | PF20434.6 | BD-FAE | 70 | 181 | 8.2e-13 | 49.1 |
| LXL04_026801 | PF10340.16 | Say1_Mug180 | 75 | 177 | 1.1e-06 | 28.5 |
| LXL04_026801 | PF07859.20 | Abhydrolase_3 | 80 | 235 | 5e-41 | 141.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.