Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1188 bp · LXL04_025932|LXL04_025932|OH1004|cDNA
ATGGCTCCCGGTTCTCAGGCACCCGCAGATGTTCCAGCCGGCAGATCCGGCGGAAAAATCTTGAAAGCGAGGAGAACTGCTGCTAGGAAGACCCCATACGACCGCCCAACTCCGCCACAGCCCGAGCCTCCACTTCTACAATCAGAAAGCCCTAGTTGGCTCGGTGGACTTGCTATGCCGGCGAAGTTTGTTGCTGGTGGTGCTAGCAAGTTTTTGTCTTCGATTTGGAACCCTAAGAGTTGGGCCACGGCTTCTTACTC...
1188 bp · LXL04_025932|LXL04_025932|OH1004|CDS
ATGGCTCCCGGTTCTCAGGCACCCGCAGATGTTCCAGCCGGCAGATCCGGCGGAAAAATCTTGAAAGCGAGGAGAACTGCTGCTAGGAAGACCCCATACGACCGCCCAACTCCGCCACAGCCCGAGCCTCCACTTCTACAATCAGAAAGCCCTAGTTGGCTCGGTGGACTTGCTATGCCGGCGAAGTTTGTTGCTGGTGGTGCTAGCAAGTTTTTGTCTTCGATTTGGAACCCTAAGAGTTGGGCCACGGCTTCTTACTC...
Protein
Download Protein FASTA395 aa · LXL04_025932|LXL04_025932|OH1004|PROTEIN
MAPGSQAPADVPAGRSGGKILKARRTAARKTPYDRPTPPQPEPPLLQSESPSWLGGLAMPAKFVAGGASKFLSSIWNPKSWATASYSSSDSDSEPEDDSGDDENPPDTSTELNQKENSSQKAEILHLVEQLLMLERYSREECDKLIDIINSRVLDYFIRDAANAGPSIIHSKTNNNETEAIMEARKWVAENKVTSGKKPDLDNGLYALKYIMTPQGTEEEGSPVEVAKSYMKTRPPWASPLKHDNSPSPSPLRDLFKENT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_025932 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_025932 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr05:118666216-118668124 (-) | ||||||
| Description | Similar to KAKU4: Protein KAKU4 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0071763 nuclear membrane organization Biological Process GO:0005634 nucleus Cellular Component GO:0005635 nuclear envelope Cellular Component GO:0005637 nuclear inner membrane Cellular Component GO:0005768 endosome Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005802 trans-Golgi network Cellular Component GO:0005886 plasma membrane Cellular Component | ||||||
| KEGG gene cross-reference | ath:AT4G31430 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q949W6 | Arabidopsis thaliana | Protein KAKU4 | 37.580% | Swiss-Prot | moderate database homology |