Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1851 bp · LXL04_025082|LXL04_025082|OH1004|cDNA
ATGTCTTACATTTTACCCCCTTCAACTTCTCTAAATAACATTACTCCCATTAATCACAACTTTCCATCTTCATCTACACCCAAAATCCTCACTTTCCCATTCTCCATCCCTTCCAAACTAACACTAACTTCCACCAAATCTTCAACCACTGCAAACTACAATGACCTCGGGTTGGACGAGGAAATGGGTCGGATCAAACGACTCCAAAATGGGTCAGATGTTCGTGGTGTGGCTGTTGAAGGAGAAGTTGGCCGGAAGGT...
1851 bp · LXL04_025082|LXL04_025082|OH1004|CDS
ATGTCTTACATTTTACCCCCTTCAACTTCTCTAAATAACATTACTCCCATTAATCACAACTTTCCATCTTCATCTACACCCAAAATCCTCACTTTCCCATTCTCCATCCCTTCCAAACTAACACTAACTTCCACCAAATCTTCAACCACTGCAAACTACAATGACCTCGGGTTGGACGAGGAAATGGGTCGGATCAAACGACTCCAAAATGGGTCAGATGTTCGTGGTGTGGCTGTTGAAGGAGAAGTTGGCCGGAAGGT...
Protein
Download Protein FASTA616 aa · LXL04_025082|LXL04_025082|OH1004|PROTEIN
MSYILPPSTSLNNITPINHNFPSSSTPKILTFPFSIPSKLTLTSTKSSTTANYNDLGLDEEMGRIKRLQNGSDVRGVAVEGEVGRKVDLTPPAVEAIAESFGEWVMKGLVKEKGRPVEDVRVSLGRDPRISGGSLSVAIFSGLGRAGCMTFDMGLATTPACFMSTMLPPFLYDASIMMTASHLPYTRNGLKFFTKNGGLTSAEVEDICDKAAFKYVNRVTKVSTLLRTTPTRVEFMNVYAKHLRDIIKERVNHPQHYDTP...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_025082 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_025082 |
|---|---|
| Location | Chr05:105665373-105670422 (-) |
| Description | Similar to algC: Phosphomannomutase/phosphoglucomutase (Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009298 GDP-mannose biosynthetic process Biological Process GO:0042121 alginic acid biosynthetic process Biological Process GO:0000287 magnesium ion binding Molecular Function GO:0004614 phosphoglucomutase activity Molecular Function GO:0004615 phosphomannomutase activity Molecular Function |
| KEGG gene cross-reference | pau:PA14_70270 ppu:PP_5288 pst:PSPTO_0083 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02878.23PGM_PMM_I68-207 aaPF02879.24PGM_PMM_II258-347 aaPF02880.23PGM_PMM_III351-451 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_025082 | PF02878.23 | PGM_PMM_I | 68 | 207 | 9.9e-21 | 74.6 |
| LXL04_025082 | PF02879.24 | PGM_PMM_II | 258 | 347 | 1.3e-19 | 71.2 |
| LXL04_025082 | PF02880.23 | PGM_PMM_III | 351 | 451 | 1.7e-11 | 44.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.