Gene Card
Gene overview
cDNA / CDS / Protein Sequences
597 bp · LXL04_024153|LXL04_024153|OH1004|cDNA
ATGGAAAGCATAGGTGCATGCGACAGCCACATGAGGGTCAAAAATCGAACGAGAGCGGGAATGAAAGTCTTGGACGAGAGAAGTTTAGCTATAATTGCTCtttataccctaactcctCAAGACCAAATAAACGAAATCAGTTCATTGCAGGATCAATGTGAGTCTTTTACCCTGACACTATCCTCTTCCCGTGAAGAACATGGCGAAAGGTACAATAATTTGGACTTTTTCATTTTAGAGAAGCTTGGGTATTTGTTCTT...
597 bp · LXL04_024153|LXL04_024153|OH1004|CDS
ATGGAAAGCATAGGTGCATGCGACAGCCACATGAGGGTCAAAAATCGAACGAGAGCGGGAATGAAAGTCTTGGACGAGAGAAGTTTAGCTATAATTGCTCTTTATACCCTAACTCCTCAAGACCAAATAAACGAAATCAGTTCATTGCAGGATCAATGTGAGTCTTTTACCCTGACACTATCCTCTTCCCGTGAAGAACATGGCGAAAGGTACAATAATTTGGACTTTTTCATTTTAGAGAAGCTTGGGTATTTGTTCTT...
Protein
Download Protein FASTA198 aa · LXL04_024153|LXL04_024153|OH1004|PROTEIN
MESIGACDSHMRVKNRTRAGMKVLDERSLAIIALYTLTPQDQINEISSLQDQCESFTLTLSSSREEHGERYNNLDFFILEKLGYLFLSIAKIFNFNRKSRLQLVSKRYKQDPTNDLTGLGICGLHCIVIAKHCDSQRSQLVSLRAFILKVKLGGGGLNAAIFEVAGPDLDSATKKQARFFTQGKAITIPLPSTSPLLT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_024153 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_024153 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr05:82731824-82733970 (+) | ||||||
| Description | Similar to BHLH140: Transcription factor bHLH140 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0000012 single strand break repair Biological Process GO:0006260 DNA replication Biological Process GO:0006351 DNA-templated transcription Biological Process GO:0006790 sulfur compound metabolic process Biological Process GO:0009150 purine ribonucleotide metabolic process Biological Process GO:0005634 nucleus Cellular Component GO:0003697 single-stranded DNA binding Molecular Function GO:0003725 double-stranded RNA binding Molecular Function GO:0005524 ATP binding Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0030983 mismatched DNA binding Molecular Function GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity Molecular Function | ||||||
| KEGG gene cross-reference | No functional description available |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q9M041 | Arabidopsis thaliana | Transcription factor bHLH140 | 48.649% | Swiss-Prot | weak database homology |