Gene Card
Gene overview
cDNA / CDS / Protein Sequences
807 bp · LXL04_023695|LXL04_023695|OH1004|cDNA
ATGCTGAGAGCCGGAAGCAGGAGGTTAGCTTCTCTCACATCTCCATGGAGGCACCAGACCTCTGCCTCTGCCTCCATCATCTCCAAAAACACTCAGATCGAGGACGCAGCCGACGATCCCCGATCGACTCACGGCCCATCCCCCTTCAACCACCCATTTCGTCCGTTCTCCAGAGGATTTGCTTCAAACTCAATAACTCCAAAATTTGAGGACGCAATCCCACCAACAGTGGCGGCCATCACAAACCCTACTTCCAAAAT...
807 bp · LXL04_023695|LXL04_023695|OH1004|CDS
ATGCTGAGAGCCGGAAGCAGGAGGTTAGCTTCTCTCACATCTCCATGGAGGCACCAGACCTCTGCCTCTGCCTCCATCATCTCCAAAAACACTCAGATCGAGGACGCAGCCGACGATCCCCGATCGACTCACGGCCCATCCCCCTTCAACCACCCATTTCGTCCGTTCTCCAGAGGATTTGCTTCAAACTCAATAACTCCAAAATTTGAGGACGCAATCCCACCAACAGTGGCGGCCATCACAAACCCTACTTCCAAAAT...
Protein
Download Protein FASTA268 aa · LXL04_023695|LXL04_023695|OH1004|PROTEIN
MLRAGSRRLASLTSPWRHQTSASASIISKNTQIEDAADDPRSTHGPSPFNHPFRPFSRGFASNSITPKFEDAIPPTVAAITNPTSKIVYDSHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLTSIEPGSTVTVKWRGKPVFIRRRTEDDVKLANSVDVASLRDPQEDAARVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFM...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_023695 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_023695 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:63464708-63467596 (-) | |||||||||
| Description | Similar to Cytochrome b-c1 complex subunit Rieske-2, mitochondrial | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c Biological Process GO:0009060 aerobic respiration Biological Process GO:0009408 response to heat Biological Process GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0009536 plastid Cellular Component GO:0031966 mitochondrial membrane Cellular Component GO:0045275 respiratory chain complex III Cellular Component GO:0008121 quinol-cytochrome-c reductase activity Molecular Function GO:0016491 oxidoreductase activity Molecular Function GO:0046872 metal ion binding Molecular Function GO:0051537 2 iron, 2 sulfur cluster binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT5G13430 ath:AT5G13440 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02921.20UCR_TM100-139 aaPF00355.33Rieske198-253 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_023695 | PF02921.20 | UCR_TM | 100 | 139 | 6.2e-09 | 36.8 |
| LXL04_023695 | PF00355.33 | Rieske | 198 | 253 | 5.5e-09 | 36.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.