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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_023692
Reference: OH-1004 Chr: Chr05 Coordinates: 63276124-63279282 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

981 bp · LXL04_023692|LXL04_023692|OH1004|cDNA

ATGACTAAACCGATACTGGCTTGTGTTGCTTTTGTTTTGAGACTCCATACACCCAAGAAAAGGTCAACATCGGCAGTGGCCCACCACCCACCAGGGTCAAAAATCGGATTGTTTCGTTCTGCAAGCAATGGACCAAGATTTATCAACACTGTCACCTTCGACAGCAAAGAGGAGCCACCTACTCTTATATGCAGCTGCTCAGGCTTTTTCTTTAGAGATTTTGATGCTCTCACCAAATATTTTAGGGTGATTGCAATCAA...

981 bp · LXL04_023692|LXL04_023692|OH1004|CDS

ATGACTAAACCGATACTGGCTTGTGTTGCTTTTGTTTTGAGACTCCATACACCCAAGAAAAGGTCAACATCGGCAGTGGCCCACCACCCACCAGGGTCAAAAATCGGATTGTTTCGTTCTGCAAGCAATGGACCAAGATTTATCAACACTGTCACCTTCGACAGCAAAGAGGAGCCACCTACTCTTATATGCAGCTGCTCAGGCTTTTTCTTTAGAGATTTTGATGCTCTCACCAAATATTTTAGGGTGATTGCAATCAA...

326 aa · LXL04_023692|LXL04_023692|OH1004|PROTEIN

MTKPILACVAFVLRLHTPKKRSTSAVAHHPPGSKIGLFRSASNGPRFINTVTFDSKEEPPTLICSCSGFFFRDFDALTKYFRVIAINQLGRVHYLLGRIKQYNDPTSLAMVVSWLMQKLSHGLLILSRNGEKPKTLKSLFAWTFLWRICCVQIVLKGKSPYKNIRYNDLTILWTLKHPKHIEQLILFRATWRGAVMNHLWESNFTPMKVLGGIGLWGPTLVRRYTSARFGEYSTVDVLRYEEYRILTDYIYHTLAAKGSG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_023692
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_023692
LocationChr05:63276124-63279282 (-)
DescriptionSimilar to Os09g0520200: Probable 1-acylglycerol-3-phosphate O-acyltransferase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g24160 Lysophosphatidic acid acyltransferase which functions in phosphatidic acid biosynthesis.

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0520200 Lysophosphatidic acid acyltransferase which functions in phosphatidic acid biosynthesis. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023692 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006654 phosphatidic acid biosynthetic process Biological Process
GO:0055088 lipid homeostasis Biological Process
GO:0055089 fatty acid homeostasis Biological Process
GO:0055091 phospholipid homeostasis Biological Process
GO:0070328 triglyceride homeostasis Biological Process
GO:0071456 cellular response to hypoxia Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity Molecular Function
GO:0004623 A2-type glycerophospholipase activity Molecular Function
GO:0016298 lipase activity Molecular Function
GO:0042171 lysophosphatidic acid acyltransferase activity Molecular Function
KEGG gene cross-reference
ath:AT4G24160
dosa:Os09g0520200
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.328
Rank 1 · LXL04_023692 · OH-1004
Cytoplasm0.218
Rank 2 · LXL04_023692 · OH-1004
Nucleus0.188
Rank 3 · LXL04_023692 · OH-1004
Endoplasmic reticulum0.168
Rank 4 · LXL04_023692 · OH-1004
Cell membrane0.106
Rank 5 · LXL04_023692 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O22975Arabidopsis thaliana1-acylglycerol-3-phosphate O-acyltransferase41.935%Swiss-Protmoderate database homology
Q0J0A4Oryza sativa subsp. japonicaProbable 1-acylglycerol-3-phosphate O-acyltransferase42.125%Swiss-Protmoderate database homology

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