Gene Card
Gene overview
cDNA / CDS / Protein Sequences
306 bp · LXL04_021775|LXL04_021775|OH1004|cDNA
ATGATACCAATTCTCGCAAGATTTGTCGaaaaatattttgaaaaaacCCCTAAATTTGACATGACATCTTTGCTTAGAGGGACCGACGCCGTCTTTTCTTCTCTCATCCACTCTTTCAATTGGAACCTTGCAACATTTCTTCATGCATACACGTGTCTTCCACTTGCTTACACCACAAGCCAAACCGTTGTGCAATTTTGCAAGATGTTGCTGATAAAATGTTTCCTAATTTGCAGCAATCAGCCATGGCTGCCAGGCTA...
306 bp · LXL04_021775|LXL04_021775|OH1004|CDS
ATGATACCAATTCTCGCAAGATTTGTCGAAAAATATTTTGAAAAAACCCCTAAATTTGACATGACATCTTTGCTTAGAGGGACCGACGCCGTCTTTTCTTCTCTCATCCACTCTTTCAATTGGAACCTTGCAACATTTCTTCATGCATACACGTGTCTTCCACTTGCTTACACCACAAGCCAAACCGTTGTGCAATTTTGCAAGATGTTGCTGATAAAATGTTTCCTAATTTGCAGCAATCAGCCATGGCTGCCAGGCTA...
Protein
Download Protein FASTA101 aa · LXL04_021775|LXL04_021775|OH1004|PROTEIN
MIPILARFVEKYFEKTPKFDMTSLLRGTDAVFSSLIHSFNWNLATFLHAYTCLPLAYTTSQTVVQFCKMLLIKCFLICSNQPWLPGYVLIESSFPFFVLCK
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_021775 |
|---|---|
| TK1151 ID | TkA05G420200 |
| OH-1004 ID | LXL04_021775 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_021775 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:136745854-136746231 (+) | ||||||||||||
| Description | Similar to MON1: Vacuolar fusion protein MON1 homolog | ||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
| ||||||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||||||||
| GO annotations (OH1004 source) | GO:0006623 protein targeting to vacuole Biological Process GO:0006886 intracellular protein transport Biological Process GO:0007033 vacuole organization Biological Process GO:0016192 vesicle-mediated transport Biological Process GO:0045324 late endosome to vacuole transport Biological Process GO:0099402 plant organ development Biological Process GO:0005634 nucleus Cellular Component GO:0005768 endosome Cellular Component GO:0005085 guanyl-nucleotide exchange factor activity Molecular Function | ||||||||||||
| KEGG gene cross-reference | ath:AT2G28390 dosa:Os01g0976000 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.