Gene Card
Gene overview
cDNA / CDS / Protein Sequences
834 bp · LXL04_020387|LXL04_020387|OH1004|cDNA
ATGACTGCTACCTGCGACGACGACGCTCTGCTACCTGCGACTCCATCTAGGGTTTCTCCTCCCGCTGCTACCTGCGATGACTGCTACCTGCGACGACGCTCTGCTACCTGCGACGACGCTCGGCCAAAAGCTTCACTCCAGCTGCGCCGACGATTTGCGAAATCAACGCCGGTGAGAAAAGAAGGTGCTGTAATGAATTTCATTGAATCTGTCTTTTCATTTGTGTTTGGTGATGGTGATCCAAATGAAGGTATTGAAGA...
834 bp · LXL04_020387|LXL04_020387|OH1004|CDS
ATGACTGCTACCTGCGACGACGACGCTCTGCTACCTGCGACTCCATCTAGGGTTTCTCCTCCCGCTGCTACCTGCGATGACTGCTACCTGCGACGACGCTCTGCTACCTGCGACGACGCTCGGCCAAAAGCTTCACTCCAGCTGCGCCGACGATTTGCGAAATCAACGCCGGTGAGAAAAGAAGGTGCTGTAATGAATTTCATTGAATCTGTCTTTTCATTTGTGTTTGGTGATGGTGATCCAAATGAAGGTATTGAAGA...
Protein
Download Protein FASTA277 aa · LXL04_020387|LXL04_020387|OH1004|PROTEIN
MTATCDDDALLPATPSRVSPPAATCDDCYLRRRSATCDDARPKASLQLRRRFAKSTPVRKEGAVMNFIESVFSFVFGDGDPNEGIEEERWKLIGQYITSNGGVVTAEELAPYLDVETADIMVMALKERGIRAEHLSTAQTNTSAQKNAESGQYDLLYMTPEKACNIPNRVRNDIIGSLMMKNPRIAIGSFDRKNLYYGVKSINRGVSFIVNLTLLFIGSLTMKAREESHRFTKSLESYYQESGRCGRDGIGSDCWIYFSR...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_020387 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_020387 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:72749728-72751648 (+) | |||||||||
| Description | Similar to At5g03900: Uncharacterized protein At5g03900, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000724 double-strand break repair via homologous recombination Biological Process GO:0006260 DNA replication Biological Process GO:0006281 DNA repair Biological Process GO:0006310 DNA recombination Biological Process GO:0005634 nucleus Cellular Component GO:0005694 chromosome Cellular Component GO:0005737 cytoplasm Cellular Component GO:0009507 chloroplast Cellular Component GO:0009536 plastid Cellular Component GO:0009941 chloroplast envelope Cellular Component GO:0016592 mediator complex Cellular Component GO:0031969 chloroplast membrane Cellular Component | |||||||||
| KEGG gene cross-reference | ath:AT1G31360 ath:AT5G03900 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.