Gene Card
Gene overview
cDNA / CDS / Protein Sequences
640 bp · LXL04_016023|LXL04_016023|OH1004|cDNA
ATGGTAACCGCGTGTTTGGTTAACTGTCTACAGGCCATGATGGTAAAACGCCACTTTCGTTATCTTTTGCAAGGATATGGAGATAATATTGATGTTGATCTAACTAACCAGCATGGTAACAAGAGCCTTTTAAACCTGGTATTTGCCACTGAAATGGAAAAACTTCAAGATGTTTGGTGCTTCTTTACTCTTTGTTCCAATGAAGATCCTTACTATGTACTGGCAACCGGTCCCCCTTTTCCATATTATGTACCTTACGG...
606 bp · LXL04_016023|LXL04_016023|OH1004|CDS
ATGGTAACCGCGTGTTTGGTTAACTGTCTACAGGCCATGATGGTAAAACGCCACTTTCGTTATCTTTTGCAAGGATATGGAGATAATATTGATGTTGATCTAACTAACCAGCATGGTAACAAGAGCCTTTTAAACCTGGTATTTGCCACTGAAATGGAAAAACTTCAAGATGTTTGGTGCTTCTTTACTCTTTGTTCCAATGAAGATCCTTACTATGTACTGGCAACCGGTCCCCCTTTTCCATATTATGTACCTTACGG...
Protein
Download Protein FASTA201 aa · LXL04_016023|LXL04_016023|OH1004|PROTEIN
MVTACLVNCLQAMMVKRHFRYLLQGYGDNIDVDLTNQHGNKSLLNLVFATEMEKLQDVWCFFTLCSNEDPYYVLATGPPFPYYVPYGVRNDGPNGAGKKFQNNKEDMSNSVTLGVAEEHIRIVVGRSVITVSDYVYIMIPAMTVIHETIFLGTETAAALKAQTSTDHESSTERISIEIWQMKPIIIKVPCKNYEALSSIWY
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_016023 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_016023 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:104151567-104153280 (-) | |||||||||
| Description | Similar to BTR1: Protein BTR1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006396 RNA processing Biological Process GO:0008380 RNA splicing Biological Process GO:0046719 regulation by virus of viral protein levels in host cell Biological Process GO:0046856 phosphatidylinositol dephosphorylation Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0003727 single-stranded RNA binding Molecular Function GO:0003729 mRNA binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G51830 ath:AT5G04430 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.