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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_015664
Reference: OH-1004 Chr: Chr03 Coordinates: 79492744-79496272 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

828 bp · LXL04_015664|LXL04_015664|OH1004|cDNA

ATGTTGATCAATTTAATCAAATTATGTTTGATTTTTATCCGTGCTTTTAAGGATGTTGATCCTATTGTGGCAGTGTTCTCTGCAGGACCAGTTGGTGTATCCAGCTTTAGCAATTGCTGTCTTAAGCAACTCATTAGGATCAACAACCCTTCTATTGTAATGAATGTGGCATTGATCCTATGGAGGAACAATGAAACTGTTTGCAATCAGGGGCAATTATGGAACAAAGTTGAGGATGATGTGGTTTCAAATCGGTTGGT...

828 bp · LXL04_015664|LXL04_015664|OH1004|CDS

ATGTTGATCAATTTAATCAAATTATGTTTGATTTTTATCCGTGCTTTTAAGGATGTTGATCCTATTGTGGCAGTGTTCTCTGCAGGACCAGTTGGTGTATCCAGCTTTAGCAATTGCTGTCTTAAGCAACTCATTAGGATCAACAACCCTTCTATTGTAATGAATGTGGCATTGATCCTATGGAGGAACAATGAAACTGTTTGCAATCAGGGGCAATTATGGAACAAAGTTGAGGATGATGTGGTTTCAAATCGGTTGGT...

275 aa · LXL04_015664|LXL04_015664|OH1004|PROTEIN

MLINLIKLCLIFIRAFKDVDPIVAVFSAGPVGVSSFSNCCLKQLIRINNPSIVMNVALILWRNNETVCNQGQLWNKVEDDVVSNRLVYWRWVLKWRFHVISLWQQIAVYTLKLILRWVVDPNELLKTAIAKAGYTGKVVIGMDVAASEFYAEKGKTYDLNFKEVLIRYVGLLIQFLIRPVIHTRTSGMTSRKRSNDDDDDFVYGDKGFRAIFETSYICYRLVVNIIESRRTTSQQEFNVMNNRVLYTIVFVTIVWVLYIS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_015664
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_015664
LocationChr03:79492744-79496272 (+)
DescriptionSimilar to ENO1: Enolase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g36530 Multifunctional enzyme that acts as an enolase involved in the metabolism and as a positive regulator of cold-responsive gene transcription.

Rice

Reference gene IDPossible functionPapers / DOI
Os10g0167300 Enolase. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015664 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006096 glycolytic process Biological Process
GO:0006351 DNA-templated transcription Biological Process
GO:0009409 response to cold Biological Process
GO:0009416 response to light stimulus Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0046686 response to cadmium ion Biological Process
GO:0000015 phosphopyruvate hydratase complex Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005739 mitochondrion Cellular Component
GO:0005740 mitochondrial envelope Cellular Component
GO:0005741 mitochondrial outer membrane Cellular Component
KEGG gene cross-reference
ath:AT2G36530
dosa:Os10g0167300
rcu:8288376
zma:542316
zma:732811
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.273
Rank 1 · LXL04_015664 · OH-1004
Nucleus0.220
Rank 2 · LXL04_015664 · OH-1004
Cytoplasm0.211
Rank 3 · LXL04_015664 · OH-1004
Endoplasmic reticulum0.199
Rank 4 · LXL04_015664 · OH-1004
Cell membrane0.108
Rank 5 · LXL04_015664 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00113.29Enolase_C123-163 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_015664PF00113.29Enolase_C1231633.7e-1246.9

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
P25696Arabidopsis thalianaBifunctional enolase 2/transcriptional activator90.244%Swiss-Protweak database homology
Q42971Oryza sativa subsp. japonicaEnolase90.244%Swiss-Protweak database homology

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