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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_015407
Reference: OH-1004 Chr: Chr03 Coordinates: 71117716-71119228 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1446 bp · LXL04_015407|LXL04_015407|OH1004|cDNA

ATGGAAACAATGGCCACAACTGAGAAGAAGCCTCATGTCATTTTTATCCCAATGCCGGCTCAAAGCCACGTGAAGGCGATGCTCAAACTAGCGCAACTTCTACACCACAAGGGCCTCCAAATAACCTTCATTAACACAGAGTTCATCCACAAGCGTTTGCTCAAGTCTGGTGGGGCCCATAGCCTCGATGGATCAGATGGTTTCAAATTTGCGTCCATTCCTGACAGCATCCCTCGCAGttctgaagatgatgatggtcT...

1446 bp · LXL04_015407|LXL04_015407|OH1004|CDS

ATGGAAACAATGGCCACAACTGAGAAGAAGCCTCATGTCATTTTTATCCCAATGCCGGCTCAAAGCCACGTGAAGGCGATGCTCAAACTAGCGCAACTTCTACACCACAAGGGCCTCCAAATAACCTTCATTAACACAGAGTTCATCCACAAGCGTTTGCTCAAGTCTGGTGGGGCCCATAGCCTCGATGGATCAGATGGTTTCAAATTTGCGTCCATTCCTGACAGCATCCCTCGCAGTTCTGAAGATGATGATGGTCT...

481 aa · LXL04_015407|LXL04_015407|OH1004|PROTEIN

METMATTEKKPHVIFIPMPAQSHVKAMLKLAQLLHHKGLQITFINTEFIHKRLLKSGGAHSLDGSDGFKFASIPDSIPRSSEDDDGLEHLLSCIETHFLDPFLDLATKLSTPPTLIISDGFMSVFTINAARKLGIPVMLYWTLSACGFMGFYHTKSLMEKGLTPLKDESYLTNGFLETIVDWIPGMKEIQLKHFPTNIRITDPTDKLFTFCMEATQNVHNVSYVIIHTFDTLENSLVDALLSMIPHVYTVGPLQLLLNQI...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_015407
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_015407
LocationChr03:71117716-71119228 (-)
DescriptionSimilar to UGT85C2: UDP-glycosyltransferase 85C2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_015407 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:1900994 (-)-secologanin biosynthetic process Biological Process
GO:0008194 UDP-glycosyltransferase activity Molecular Function
GO:0035251 UDP-glucosyltransferase activity Molecular Function
GO:0080043 quercetin 3-O-glucosyltransferase activity Molecular Function
GO:0080044 quercetin 7-O-glucosyltransferase activity Molecular Function
GO:0102377 steviol 13-O glucosyltransferase activity Molecular Function
GO:0102378 steviolmonoside glucosyltransferase activity Molecular Function
KEGG gene cross-reference
ag:ABV68925
ag:BAK55737
ag:BAK55749
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.751
Rank 1 · LXL04_015407 · OH-1004
Nucleus0.175
Rank 2 · LXL04_015407 · OH-1004
Endoplasmic reticulum0.091
Rank 3 · LXL04_015407 · OH-1004
Peroxisome0.068
Rank 4 · LXL04_015407 · OH-1004
Cell membrane0.043
Rank 5 · LXL04_015407 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00201.25UDPGT210-437 aa
PF06722.19EryCIII-like_C358-461 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_015407PF00201.25UDPGT2104373.9e-2176.2
LXL04_015407PF06722.19EryCIII-like_C3584615.1e-0730.5

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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