Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1482 bp · LXL04_013051|LXL04_013051|OH1004|cDNA
ATGGATAATGCTCTGAGATTAGCTTTGTTGCTGGTGCTTATTGCCAAAGGTATAAATAGTTTGAATATGTGTAGGTATGCATGTAGTTATCCTTCTAATCAGTCGTTCCATTGGCACTCAGTTTATCCATCTTCTAGTGCGTATGAGTTTGAGCATTGCAAGAATACGGTCAAGCAATGGGCGTCTTCATCTCTTCACTCCAATATCAAGGATGGGCACATTCTGCAGGACTTGTTGTTCTTCCTTCATGTCCCAAGAAC...
1482 bp · LXL04_013051|LXL04_013051|OH1004|CDS
ATGGATAATGCTCTGAGATTAGCTTTGTTGCTGGTGCTTATTGCCAAAGGTATAAATAGTTTGAATATGTGTAGGTATGCATGTAGTTATCCTTCTAATCAGTCGTTCCATTGGCACTCAGTTTATCCATCTTCTAGTGCGTATGAGTTTGAGCATTGCAAGAATACGGTCAAGCAATGGGCGTCTTCATCTCTTCACTCCAATATCAAGGATGGGCACATTCTGCAGGACTTGTTGTTCTTCCTTCATGTCCCAAGAAC...
Protein
Download Protein FASTA493 aa · LXL04_013051|LXL04_013051|OH1004|PROTEIN
MDNALRLALLLVLIAKGINSLNMCRYACSYPSNQSFHWHSVYPSSSAYEFEHCKNTVKQWASSSLHSNIKDGHILQDLLFFLHVPRTGGRTYFYCFLKKLYSGSLECPRSYDKLRFDPRKQNCRLLATHDDYSIMSKLPREKSSVVTVLRNPIDRVFSAYEFSIEVAARFLVHPNLTSATKMPANSRSKKGVISTLDIWPWKYLVPWMREELFTKRDARKRKGPPYAYGDDSYNMEEIVTPLHEFINHPVALDLVHNGAT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_013051 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_013051 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr03:23152267-23154812 (-) | ||||||
| Description | Similar to TPST: Protein-tyrosine sulfotransferase | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0009733 response to auxin Biological Process GO:0010082 regulation of root meristem growth Biological Process GO:0010366 negative regulation of ethylene biosynthetic process Biological Process GO:0010468 regulation of gene expression Biological Process GO:0015012 heparan sulfate proteoglycan biosynthetic process Biological Process GO:0019827 stem cell population maintenance Biological Process GO:0045087 innate immune response Biological Process GO:0055070 copper ion homeostasis Biological Process GO:0000139 Golgi membrane Cellular Component GO:0005768 endosome Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005802 trans-Golgi network Cellular Component | ||||||
| KEGG gene cross-reference | ath:AT1G08030 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q3EDG5 | Arabidopsis thaliana | Protein-tyrosine sulfotransferase | 54.507% | Swiss-Prot | strong database homology |