Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1737 bp · LXL04_012168|LXL04_012168|OH1004|cDNA
ATGGCGACTGCCGTCCCACCTTCGCCGCTGATGCGTCTCAACACCTTTGTTGGCAGATCCCGATTCGGAAAACGATTCAAACTCGATGAACGTAATACCACCTTCACCACCGAGCTCCGGGCAGGCACCACCACTTTCCTCACCATGGCATATATCCTCGCTGTTAACGCCTCCATCCTCTCCGATTCCGGCGCCACTTGTTCTGTCTCCGACTGCATCCCTCTCTGCTCTGATCCCTCTTTCACCACCAATTGCACCGG...
1737 bp · LXL04_012168|LXL04_012168|OH1004|CDS
ATGGCGACTGCCGTCCCACCTTCGCCGCTGATGCGTCTCAACACCTTTGTTGGCAGATCCCGATTCGGAAAACGATTCAAACTCGATGAACGTAATACCACCTTCACCACCGAGCTCCGGGCAGGCACCACCACTTTCCTCACCATGGCATATATCCTCGCTGTTAACGCCTCCATCCTCTCCGATTCCGGCGCCACTTGTTCTGTCTCCGACTGCATCCCTCTCTGCTCTGATCCCTCTTTCACCACCAATTGCACCGG...
Protein
Download Protein FASTA578 aa · LXL04_012168|LXL04_012168|OH1004|PROTEIN
MATAVPPSPLMRLNTFVGRSRFGKRFKLDERNTTFTTELRAGTTTFLTMAYILAVNASILSDSGATCSVSDCIPLCSDPSFTTNCTGPDLRLIQPDISCKFPPVNPGYTACLERVRKDLIVATVASSLIGCVIMGTFANLPLALAPGMGTNAYFAYTVVGFHGSGNISYESALAAVFIEGLIFLLVSAVGLRAKLAKLVPKPVRISSSAGIGLFLAFIGFQNNEGIGLIGYSSSTLVTLGACPSSSRASLAPVITFPNGT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_012168 |
|---|---|
| TK1151 ID | TkA02G584030 |
| OH-1004 ID | LXL04_012168 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 93.700 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 98.270Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_012168 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:7688313-7690049 (-) | |||||||||
| Description | Similar to AZG1: Adenine/guanine permease AZG1 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006863 purine nucleobase transport Biological Process GO:0015853 adenine transport Biological Process GO:0015854 guanine transport Biological Process GO:0051503 adenine nucleotide transport Biological Process GO:0098702 adenine import across plasma membrane Biological Process GO:0098710 guanine import across plasma membrane Biological Process GO:1903790 guanine nucleotide transmembrane transport Biological Process GO:0000139 Golgi membrane Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0000295 adenine nucleotide transmembrane transporter activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G10960 ath:AT5G50300 mja:MJ_0326 spo:2541241 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00860.27Xan_ur_permease115-229 aaPF00860.27Xan_ur_permease281-517 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_012168 | PF00860.27 | Xan_ur_permease | 115 | 229 | 6e-29 | 101.6 |
| LXL04_012168 | PF00860.27 | Xan_ur_permease | 281 | 517 | 6e-29 | 101.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.