Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1401 bp · LXL04_009610|LXL04_009610|OH1004|cDNA
ATGAACATGGGTTCAACAGCTCAGCAGAAGAAAACCCTACACTCGATGTTAGCAAGCAAGCTCAATAACCTCACCATTCCGCCATCATCAAATGATCAAGACTTCGATTTTGCCGATGTATTTGGCCCTAATTCATCATCTTCAGCTAATCCTAACCCTAACCTCTTCATAGGCGACCCCCAAATTATCCACAATCGATCCCACTCCTTCATTGGGCCCTCCCCTCGCTACACCCTCTCCAAATCCCTAACTTTTCACCA...
1401 bp · LXL04_009610|LXL04_009610|OH1004|CDS
ATGAACATGGGTTCAACAGCTCAGCAGAAGAAAACCCTACACTCGATGTTAGCAAGCAAGCTCAATAACCTCACCATTCCGCCATCATCAAATGATCAAGACTTCGATTTTGCCGATGTATTTGGCCCTAATTCATCATCTTCAGCTAATCCTAACCCTAACCTCTTCATAGGCGACCCCCAAATTATCCACAATCGATCCCACTCCTTCATTGGGCCCTCCCCTCGCTACACCCTCTCCAAATCCCTAACTTTTCACCA...
Protein
Download Protein FASTA466 aa · LXL04_009610|LXL04_009610|OH1004|PROTEIN
MNMGSTAQQKKTLHSMLASKLNNLTIPPSSNDQDFDFADVFGPNSSSSANPNPNLFIGDPQIIHNRSHSFIGPSPRYTLSKSLTFHHEFDLESSGEDEDLIKVEKEEEYEVEEKARLESLDYKIAPGDFEIMRVIGKGSFGKVFQVRRKDRSVINGEGEGVIGDGIFAMKVMRKDTIIKNNHVDYMKAERDILTKVVHPFIVQLRYSFQTKTKLYLILDFINGGHLFFHLYRQGIFSEDQARVYTAEIVSAVSHLHQNGI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_009610 |
|---|---|
| TK1151 ID | TkA03G451170 |
| OH-1004 ID | LXL04_009610 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 99.500 |
| Protein coverage (%) | TK1151 95.588 / OH-1004 41.845Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_009610 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr02:129648212-129650281 (-) | |||||||||
| Description | Similar to ATPK2: Serine/threonine-protein kinase AtPK2/AtPK19 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006417 regulation of translation Biological Process GO:0006468 protein phosphorylation Biological Process GO:0006970 response to osmotic stress Biological Process GO:0008285 negative regulation of cell population proliferation Biological Process GO:0009408 response to heat Biological Process GO:0009409 response to cold Biological Process GO:0009651 response to salt stress Biological Process GO:0018105 peptidyl-serine phosphorylation Biological Process GO:0030334 regulation of cell migration Biological Process GO:0031269 pseudopodium assembly Biological Process GO:0031929 TOR signaling Biological Process GO:0032060 bleb assembly Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT3G08720 ath:AT3G08730 bta:404181 ddi:DDB_G0290157 ocu:100009260 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00069.32Pkinase129-397 aaPF07714.24PK_Tyr_Ser-Thr130-380 aaPF03109.23ABC1212-296 aaPF14531.13Kinase-like239-376 aaPF17667.8Pkinase_fungal248-320 aaPF00433.30Pkinase_C418-455 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_009610 | PF00069.32 | Pkinase | 129 | 397 | 2.4e-73 | 247.5 |
| LXL04_009610 | PF07714.24 | PK_Tyr_Ser-Thr | 130 | 380 | 2.2e-36 | 126.2 |
| LXL04_009610 | PF03109.23 | ABC1 | 212 | 296 | 5.6e-07 | 29.7 |
| LXL04_009610 | PF14531.13 | Kinase-like | 239 | 376 | 5.1e-11 | 43.1 |
| LXL04_009610 | PF17667.8 | Pkinase_fungal | 248 | 320 | 9.2e-09 | 35.2 |
| LXL04_009610 | PF00433.30 | Pkinase_C | 418 | 455 | 3.6e-06 | 28.3 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.