Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1344 bp · LXL04_007240|LXL04_007240|OH1004|cDNA
ATGGATTCCAATCCAAGCTTGACGATTCTTGAACAATACAAAGTatcgccaccaccggccaccgtacCCATGAGCTCCCTGCCACTAACTTTCTTTGATTTTCCATGGTTATTGTTCCATCCGATTCACACTCTCCTCTTTTATGGTAAAGCACACTTCACCGAAACTATAATCCCACGTCTTAAAAGCTCCTTATCTATCACCCTTAAACACGTTTTCCCTTACGTTGGTAACGTGATCGTTTATCCAACTTCTCCTTC...
1344 bp · LXL04_007240|LXL04_007240|OH1004|CDS
ATGGATTCCAATCCAAGCTTGACGATTCTTGAACAATACAAAGTATCGCCACCACCGGCCACCGTACCCATGAGCTCCCTGCCACTAACTTTCTTTGATTTTCCATGGTTATTGTTCCATCCGATTCACACTCTCCTCTTTTATGGTAAAGCACACTTCACCGAAACTATAATCCCACGTCTTAAAAGCTCCTTATCTATCACCCTTAAACACGTTTTCCCTTACGTTGGTAACGTGATCGTTTATCCAACTTCTCCTTC...
Protein
Download Protein FASTA447 aa · LXL04_007240|LXL04_007240|OH1004|PROTEIN
MDSNPSLTILEQYKVSPPPATVPMSSLPLTFFDFPWLLFHPIHTLLFYGKAHFTETIIPRLKSSLSITLKHVFPYVGNVIVYPTSPSKKPEIGYVEGDSVAFTSAECNFDFTDLTGNHPRNCDKFYPLIPILSCTKVSEFVKIQIFSVQVTLFPNHGFSIGMSCHHSMGDASTQFSFLNAWTSIARCGTDELYLVNGTLPIYDRLIKYPKLDERFLKNTNLDTFNQNYQLPILSGPSDKVRSTFVLTRNVTNKLKKMVLT...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_007240 |
|---|---|
| TK1151 ID | TkA03G145430 |
| OH-1004 ID | LXL04_007240 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 77.600 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 94.855Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_007240 |
|---|---|
| Location | Chr02:40866612-40867955 (-) |
| Description | Similar to 3MAT: Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006805 xenobiotic metabolic process Biological Process GO:0009636 response to toxic substance Biological Process GO:0009698 phenylpropanoid metabolic process Biological Process GO:0009718 anthocyanin-containing compound biosynthetic process Biological Process GO:0005737 cytoplasm Cellular Component GO:0016420 malonyltransferase activity Molecular Function GO:0033809 anthocyanin 6''-O-malonyltransferase activity Molecular Function GO:0033810 anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity Molecular Function GO:0047165 flavonol-3-O-beta-glucoside O-malonyltransferase activity Molecular Function GO:0047183 anthocyanin 5-(6'''-hydroxycinnamoyltransferase) activity Molecular Function GO:0102453 anthocyanidin 3-O-glucoside 6''-O-acyltransferase activity Molecular Function |
| KEGG gene cross-reference | ag:AAL50566 ag:AAO12206 ag:BAA74428 ag:BAA93475 nta:107782063 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02458.21Transferase7-437 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_007240 | PF02458.21 | Transferase | 7 | 437 | 1.9e-44 | 152.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.