Gene Card
Gene overview
cDNA / CDS / Protein Sequences
405 bp · LXL04_007035|LXL04_007035|OH1004|cDNA
ATGGCAGGAAAGGGTGGGAAAGGTCTCTTAGCTGCAAAAACAACGGCTTCTGCTGCCGCTGCTAGTAAGGACAAAGATAAGAAGAGGCCAACATCCAGATCTTCTCGAGCTGttttttcaTCGATAATCTTAGTTGAAGCTGCTGAGTATATACAGGATGCTATATCTAAGTGGCCCCAGTTAAGGCCTTTATGTTTGATCATGAAAGATTTTCTACAACAACGGGAATTAAACGAGGTTTATTCGGGTGGGATTGGTTC...
405 bp · LXL04_007035|LXL04_007035|OH1004|CDS
ATGGCAGGAAAGGGTGGGAAAGGTCTCTTAGCTGCAAAAACAACGGCTTCTGCTGCCGCTGCTAGTAAGGACAAAGATAAGAAGAGGCCAACATCCAGATCTTCTCGAGCTGTTTTTTCATCGATAATCTTAGTTGAAGCTGCTGAGTATATACAGGATGCTATATCTAAGTGGCCCCAGTTAAGGCCTTTATGTTTGATCATGAAAGATTTTCTACAACAACGGGAATTAAACGAGGTTTATTCGGGTGGGATTGGTTC...
Protein
Download Protein FASTA134 aa · LXL04_007035|LXL04_007035|OH1004|PROTEIN
MAGKGGKGLLAAKTTASAAAASKDKDKKRPTSRSSRAVFSSIILVEAAEYIQDAISKWPQLRPLCLIMKDFLQQRELNEVYSGGIGSYAFLAMLIAMLRNSIDTHASPEYNLGVFLVLNLFSFISINFLFLFLF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_007035 |
|---|---|
| TK1151 ID | TkA03G105130 |
| OH-1004 ID | LXL04_007035 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_007035 |
|---|---|
| Location | Chr02:34184675-34185665 (-) |
| Description | Similar to Tent4a: Terminal nucleotidyltransferase 4A |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006302 double-strand break repair Biological Process GO:0006364 rRNA processing Biological Process GO:0006397 mRNA processing Biological Process GO:0006401 RNA catabolic process Biological Process GO:0007062 sister chromatid cohesion Biological Process GO:0007076 mitotic chromosome condensation Biological Process GO:0009410 response to xenobiotic stimulus Biological Process GO:0010587 miRNA catabolic process Biological Process GO:0010629 negative regulation of gene expression Biological Process GO:0031123 RNA 3'-end processing Biological Process GO:0031124 mRNA 3'-end processing Biological Process GO:0032211 negative regulation of telomere maintenance via telomerase Biological Process |
| KEGG gene cross-reference | hsa:11044 hsa:64282 mmu:210106 mmu:214627 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.