Gene Card
Gene overview
cDNA / CDS / Protein Sequences
252 bp · LXL04_006197|LXL04_006197|OH1004|cDNA
ATGGGTGGAGAAAACAAAAGGGTGGTGGGATTTGGGGGAGTGTTGTTGTTGGTGGGGTTTTGCTGTTTTTTGTTAATTGAGGTTTCGACAGTAACTCCGGAATCGGAATTGGAATTGGTGATTCCAGGTGTCAGTGTTTCAAAGGAGGCGGTGGTGTTCAACTATGTGAGTAAAAGAAGAGTACCAAATGGACCGGATCCTATTCATAACAGGAAAATTGGGATTGCGAGGGAAACGCCTGAACGAGCCTAA
252 bp · LXL04_006197|LXL04_006197|OH1004|CDS
ATGGGTGGAGAAAACAAAAGGGTGGTGGGATTTGGGGGAGTGTTGTTGTTGGTGGGGTTTTGCTGTTTTTTGTTAATTGAGGTTTCGACAGTAACTCCGGAATCGGAATTGGAATTGGTGATTCCAGGTGTCAGTGTTTCAAAGGAGGCGGTGGTGTTCAACTATGTGAGTAAAAGAAGAGTACCAAATGGACCGGATCCTATTCATAACAGGAAAATTGGGATTGCGAGGGAAACGCCTGAACGAGCCTAA
Protein
Download Protein FASTA83 aa · LXL04_006197|LXL04_006197|OH1004|PROTEIN
MGGENKRVVGFGGVLLLVGFCCFLLIEVSTVTPESELELVIPGVSVSKEAVVFNYVSKRRVPNGPDPIHNRKIGIARETPERA
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_006197 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_006197 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr02:3589756-3590645 (-) | ||||||
| Description | Similar to CLE25: CLAVATA3/ESR (CLE)-related protein 25 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0010078 maintenance of root meristem identity Biological Process GO:0010088 phloem development Biological Process GO:0010116 positive regulation of abscisic acid biosynthetic process Biological Process GO:0045168 cell-cell signaling involved in cell fate commitment Biological Process GO:0045595 regulation of cell differentiation Biological Process GO:1902584 positive regulation of response to water deprivation Biological Process GO:0005739 mitochondrion Cellular Component GO:0048046 apoplast Cellular Component GO:0033612 receptor serine/threonine kinase binding Molecular Function | ||||||
| KEGG gene cross-reference | ath:AT3G28455 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q8LFL4 | Arabidopsis thaliana | CLAVATA3/ESR (CLE)-related protein 25 | 37.805% | Swiss-Prot | moderate database homology |