Gene Card
Gene overview
cDNA / CDS / Protein Sequences
732 bp · LXL04_004740|LXL04_004740|OH1004|cDNA
ATGGAGACCGAAAATGATAGACAAAGATGTGTTGCAGCGCACAAAAACTGGATGCGGTATCATCGATACATGTACGAGGGAAACGGAGGATTCGTTGTTGTCGTCAACTTCATCGCGTTGTTTTCGGCTCAGCGTTTTCGTCGGCTTCGTTACCTCCCTCTGTTGTGTTCTATCTGCGGTGTGATCGTTTCCTCCTTCTTCGAATCGCTGATGGTTTTGTATATCAGAAGATCGAAGATCACAGACGTTACACCAACTAA...
732 bp · LXL04_004740|LXL04_004740|OH1004|CDS
ATGGAGACCGAAAATGATAGACAAAGATGTGTTGCAGCGCACAAAAACTGGATGCGGTATCATCGATACATGTACGAGGGAAACGGAGGATTCGTTGTTGTCGTCAACTTCATCGCGTTGTTTTCGGCTCAGCGTTTTCGTCGGCTTCGTTACCTCCCTCTGTTGTGTTCTATCTGCGGTGTGATCGTTTCCTCCTTCTTCGAATCGCTGATGGTTTTGTATATCAGAAGATCGAAGATCACAGACGTTACACCAACTAA...
Protein
Download Protein FASTA243 aa · LXL04_004740|LXL04_004740|OH1004|PROTEIN
METENDRQRCVAAHKNWMRYHRYMYEGNGGFVVVVNFIALFSAQRFRRLRYLPLLCSICGVIVSSFFESLMVLYIRRSKITDVTPTKKKENVSLQLVVRFIQAHLLLPQVHLISYSFLLLMFHLQLTPSSPTIPEFLTLYFLVWKRKTEQYVAGSGIPYTVIRAGDLQDKEGDIWELLIGKDDEFFEFETKIIAILDVAEVCIQELKIEEVKCKMFDHASKPKGSGTPTTDFKALFSQMTTRF
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_004740 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_004740 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:145161648-145166384 (-) | |||||||||
| Description | Similar to At2g37660: Uncharacterized protein At2g37660, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009636 response to toxic substance Biological Process GO:0009737 response to abscisic acid Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005783 endoplasmic reticulum Cellular Component GO:0005829 cytosol Cellular Component GO:0005886 plasma membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0009579 thylakoid Cellular Component GO:0048046 apoplast Cellular Component GO:0005507 copper ion binding Molecular Function GO:0016491 oxidoreductase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ag:ADE41047 ath:AT2G37660 ath:AT5G02240 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF13460.13NAD_binding_10141-207 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_004740 | PF13460.13 | NAD_binding_10 | 141 | 207 | 3.1e-06 | 27.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.