Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1272 bp · LXL04_004482|LXL04_004482|OH1004|cDNA
ATGTTTATCAAGGGATACTCAATTGCAAGTGTGGCAGAAATGGGCTGTTGTGGTTGCTTTGGGTTTTCATTTAGAAAAAAGCAGAAAAAGTCCAGGCCAAGAACATACATTGAGAATCACATTTCACAGCAGTTGCTCTTAAAcgaagaagaagtagaagaagaggaagaacacgaagaagaagaagatgatgataaTTGCTCATATGATGATGACATATCCGACACTGAAAAAGAACACCATGATGAATTCAGGAATCC...
1272 bp · LXL04_004482|LXL04_004482|OH1004|CDS
ATGTTTATCAAGGGATACTCAATTGCAAGTGTGGCAGAAATGGGCTGTTGTGGTTGCTTTGGGTTTTCATTTAGAAAAAAGCAGAAAAAGTCCAGGCCAAGAACATACATTGAGAATCACATTTCACAGCAGTTGCTCTTAAACGAAGAAGAAGTAGAAGAAGAGGAAGAACACGAAGAAGAAGAAGATGATGATAATTGCTCATATGATGATGACATATCCGACACTGAAAAAGAACACCATGATGAATTCAGGAATCC...
Protein
Download Protein FASTA423 aa · LXL04_004482|LXL04_004482|OH1004|PROTEIN
MFIKGYSIASVAEMGCCGCFGFSFRKKQKKSRPRTYIENHISQQLLLNEEEVEEEEEHEEEEDDDNCSYDDDISDTEKEHHDEFRNPAKRSEDILLYRTQNGLICREFPVKETHKVVRSEDENGNKMVNEYVRECKIGSGSYGKVVLYKSQVDGKHYAIKAFHKSHLLKLRVAPSETAMTDVLREVLIMKMLNHPNIVNLIEVIDDPNTDHFYMVLEYIEGKWVFEGSGPPGGLGQHVARSYLRDIVSGLMYLHSHNIVH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_004482 |
|---|---|
| TK1151 ID | TkA01G145570 |
| OH-1004 ID | LXL04_004482 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_004482 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:137622405-137624424 (+) | |||||||||
| Description | Similar to GRIK2: Serine/threonine-protein kinase GRIK2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006468 protein phosphorylation Biological Process GO:0009615 response to virus Biological Process GO:0010514 induction of conjugation with cellular fusion Biological Process GO:0010971 positive regulation of G2/M transition of mitotic cell cycle Biological Process GO:0019722 calcium-mediated signaling Biological Process GO:0032956 regulation of actin cytoskeleton organization Biological Process GO:0035556 intracellular signal transduction Biological Process GO:0042149 cellular response to glucose starvation Biological Process GO:0046777 protein autophosphorylation Biological Process GO:0051523 cell growth mode switching, monopolar to bipolar Biological Process GO:0051726 regulation of cell cycle Biological Process GO:0061762 CAMKK-AMPK signaling cascade Biological Process | |||||||||
| KEGG gene cross-reference | ath:AT3G45240 ath:AT5G60550 cel:CELE_C05H8.1 ddi:DDB_G0279405 spo:2538951 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00069.32Pkinase131-392 aaPF07714.24PK_Tyr_Ser-Thr135-386 aaPF14531.13Kinase-like237-342 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_004482 | PF00069.32 | Pkinase | 131 | 392 | 1.1e-58 | 199.4 |
| LXL04_004482 | PF07714.24 | PK_Tyr_Ser-Thr | 135 | 386 | 1.4e-30 | 107.2 |
| LXL04_004482 | PF14531.13 | Kinase-like | 237 | 342 | 2.5e-06 | 27.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.