Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1755 bp · LXL04_003420|LXL04_003420|OH1004|cDNA
ATGGCACAGTCTTTGAATTTCTTCGTATCATCTTCCCGTTCACCAGACTTCACAATCTCCACCAATTCATACACAAAACCTATGCTCCAAACCCCCAATCGCTTCTTGCCATTCACCAAATCCCCTCGTAAACCGCTCATTTTGGTATCCGCTTCTGCCGAGAACGGACAAGGGGCTTCATCTGCTGTGACGGCAGATTTCGTCAGTGACAATGGGACCAAACCTATCGCTATTTCACCACCTGATTCGAGTTCGATTGA...
1755 bp · LXL04_003420|LXL04_003420|OH1004|CDS
ATGGCACAGTCTTTGAATTTCTTCGTATCATCTTCCCGTTCACCAGACTTCACAATCTCCACCAATTCATACACAAAACCTATGCTCCAAACCCCCAATCGCTTCTTGCCATTCACCAAATCCCCTCGTAAACCGCTCATTTTGGTATCCGCTTCTGCCGAGAACGGACAAGGGGCTTCATCTGCTGTGACGGCAGATTTCGTCAGTGACAATGGGACCAAACCTATCGCTATTTCACCACCTGATTCGAGTTCGATTGA...
Protein
Download Protein FASTA584 aa · LXL04_003420|LXL04_003420|OH1004|PROTEIN
MAQSLNFFVSSSRSPDFTISTNSYTKPMLQTPNRFLPFTKSPRKPLILVSASAENGQGASSAVTADFVSDNGTKPIAISPPDSSSIEVDAVTEAELKENGFRSTRRTKLVCTIGPATCGFEQLEALAVGGMNVARINMCHGTREWHMTVIERVRRLNEEKGYAVAIMMDTEGSEIHMGDLGGASSAKAEDGEVWTFSVRAYDSIRPDRSITVNYDGFAEDVKVGDELLVDGGMVRFEVIEKIGPDVKCLCTDPGLLLPRA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_003420 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_003420 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:78143455-78146146 (+) | |||||||||
| Description | Similar to Pyruvate kinase isozyme A, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006096 glycolytic process Biological Process GO:0006629 lipid metabolic process Biological Process GO:0010431 seed maturation Biological Process GO:0005737 cytoplasm Cellular Component GO:0009507 chloroplast Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0000287 magnesium ion binding Molecular Function GO:0004743 pyruvate kinase activity Molecular Function GO:0005524 ATP binding Molecular Function GO:0016301 kinase activity Molecular Function GO:0030955 potassium ion binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G32440 ath:AT3G22960 nta:107822892 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF00224.28PK105-436 aaPF02887.22PK_C475-574 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_003420 | PF00224.28 | PK | 105 | 436 | 1.4e-89 | 301.1 |
| LXL04_003420 | PF02887.22 | PK_C | 475 | 574 | 4.2e-24 | 85.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.