Gene Card
Gene overview
cDNA / CDS / Protein Sequences
471 bp · LXL04_000709|LXL04_000709|OH1004|cDNA
ATGGAAGTAAACAACAAGAACATTGTGCATGACTTATACAAGGCATTGGCTGCCCGTGACTTCATCAGGGTGCAATGTCTCCTAGCTCCAGATATTGATTGGTGGTTCCATGGCCCACCCAATCATAAATACAACCTTATGCACTTGCTCACTGGAAGTTGTGTTTTAGACGACAATATGGACTATTTTAAACCTGTCGCTATTCATGGTTTTGGGTCGATGGTGGTTGCTGAGGGCTACCATCTTCATGGGAACCGGAA...
471 bp · LXL04_000709|LXL04_000709|OH1004|CDS
ATGGAAGTAAACAACAAGAACATTGTGCATGACTTATACAAGGCATTGGCTGCCCGTGACTTCATCAGGGTGCAATGTCTCCTAGCTCCAGATATTGATTGGTGGTTCCATGGCCCACCCAATCATAAATACAACCTTATGCACTTGCTCACTGGAAGTTGTGTTTTAGACGACAATATGGACTATTTTAAACCTGTCGCTATTCATGGTTTTGGGTCGATGGTGGTTGCTGAGGGCTACCATCTTCATGGGAACCGGAA...
Protein
Download Protein FASTA156 aa · LXL04_000709|LXL04_000709|OH1004|PROTEIN
MEVNNKNIVHDLYKALAARDFIRVQCLLAPDIDWWFHGPPNHKYNLMHLLTGSCVLDDNMDYFKPVAIHGFGSMVVAEGYHLHGNRKTCWVHAWTVENGTIITRVREYLNTSLTVFSFRKSDNAYNLVSPCYPKCKNVWQSELADNASVPHLLLVI
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_000709 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_000709 | ||||||
|---|---|---|---|---|---|---|---|
| Location | Chr01:13002347-13002817 (+) | ||||||
| Description | Similar to WUN1: Wound-induced protein 1 | ||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | ||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | ||||||
| GO annotations (OH1004 source) | GO:0002238 response to molecule of fungal origin Biological Process GO:0009620 response to fungus Biological Process GO:0009624 response to nematode Biological Process GO:0010150 leaf senescence Biological Process GO:0010193 response to ozone Biological Process | ||||||
| KEGG gene cross-reference | ath:AT3G10985 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07107.18WI1247-156 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_000709 | PF07107.18 | WI12 | 47 | 156 | 7.3e-23 | 81.5 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
Q94AK6 | Arabidopsis thaliana | Senescence associated gene 20 | 39.130% | Swiss-Prot | moderate database homology |