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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_000435
Reference: OH-1004 Chr: Chr01 Coordinates: 8219116-8220442 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1044 bp · LXL04_000435|LXL04_000435|OH1004|cDNA

ATGGCGAAATATGGTGAAGGGGATAAGCGTTGGATCGTTGAAGACAGACCAGACGGAGCTAATGTTCACAACTGGCATTGGGCCGAAACCAATTGCCTCGAATGGTCCAGGAACTTACTGTCGAAGCTCCTCGCGGACCAAACAATACTCGACGGCGAAGGAAACCTCTTCATCAAGACGAAAAAGATCGAAAAGGTCGAAGGAGAGGCTTACGTTAATGTCCGAAAGGGGAAAATTATTCCCGGATACGAATTAAGTGT...

1044 bp · LXL04_000435|LXL04_000435|OH1004|CDS

ATGGCGAAATATGGTGAAGGGGATAAGCGTTGGATCGTTGAAGACAGACCAGACGGAGCTAATGTTCACAACTGGCATTGGGCCGAAACCAATTGCCTCGAATGGTCCAGGAACTTACTGTCGAAGCTCCTCGCGGACCAAACAATACTCGACGGCGAAGGAAACCTCTTCATCAAGACGAAAAAGATCGAAAAGGTCGAAGGAGAGGCTTACGTTAATGTCCGAAAGGGGAAAATTATTCCCGGATACGAATTAAGTGT...

347 aa · LXL04_000435|LXL04_000435|OH1004|PROTEIN

MAKYGEGDKRWIVEDRPDGANVHNWHWAETNCLEWSRNLLSKLLADQTILDGEGNLFIKTKKIEKVEGEAYVNVRKGKIIPGYELSVSINWQGEARDADGKSLLVADGVIEIPYIADENADEDPDLRVIVKDEGPIGRRLKDAFLAKGKEFVLKQIRVYVDAMAKGGPAKDELEVKKVNPKPASAPVSAPPAAAPVKKVEVKKEKKKEGFKTIKLTEKFSCRAKDMFEILMDENRWKGFTQSNARISKEVGGEISIFDGS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_000435
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_000435
LocationChr01:8219116-8220442 (+)
DescriptionSimilar to AHSA1: Activator of 90 kDa heat shock protein ATPase homolog 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_000435 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0032781 positive regulation of ATP-dependent activity Biological Process
GO:0036506 maintenance of unfolded protein Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005829 cytosol Cellular Component
GO:0070062 extracellular exosome Cellular Component
GO:0001671 ATPase activator activity Molecular Function
GO:0044183 protein folding chaperone Molecular Function
GO:0045296 cadherin binding Molecular Function
GO:0051082 unfolded protein binding Molecular Function
GO:0051087 protein-folding chaperone binding Molecular Function
KEGG gene cross-reference
bta:531017
ddi:DDB_G0269712
hsa:10598
mmu:217737
mmu:268390
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.734
Rank 1 · LXL04_000435 · OH-1004
Nucleus0.337
Rank 2 · LXL04_000435 · OH-1004
Cell membrane0.126
Rank 3 · LXL04_000435 · OH-1004
Endoplasmic reticulum0.085
Rank 4 · LXL04_000435 · OH-1004
Mitochondrion0.076
Rank 5 · LXL04_000435 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF09229.18Aha1_N29-165 aa
PF08327.18AHSA1223-343 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
LXL04_000435PF09229.18Aha1_N291651.3e-29103.9
LXL04_000435PF08327.18AHSA12233437.3e-1452.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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