Gene Card
Gene overview
cDNA / CDS / Protein Sequences
339 bp · LXL04_000175|LXL04_000175|OH1004|cDNA
ATGGGTTGTTTGCGTTTAACTCAACGGCAGTGGCTCTTCGGAAAAGGGAAAGATCTTCAGTTCATCGGGGAAGGAGATGGGTGGTGTTGGCGGGGGAGGAAGGATGTCATTTACCTGGACGAGTCGTTTTCTCATGAAGCTGTTAACGACGAAAATTCATTTGAATTGGGAATCATAAGCCTTGTATGTTGGGGTGTCGCGGAAATCCCTCAAATCATCACCAACTTCCGTTCGAAATCAAGCCATGGCGTCTCCCTAAT...
339 bp · LXL04_000175|LXL04_000175|OH1004|CDS
ATGGGTTGTTTGCGTTTAACTCAACGGCAGTGGCTCTTCGGAAAAGGGAAAGATCTTCAGTTCATCGGGGAAGGAGATGGGTGGTGTTGGCGGGGGAGGAAGGATGTCATTTACCTGGACGAGTCGTTTTCTCATGAAGCTGTTAACGACGAAAATTCATTTGAATTGGGAATCATAAGCCTTGTATGTTGGGGTGTCGCGGAAATCCCTCAAATCATCACCAACTTCCGTTCGAAATCAAGCCATGGCGTCTCCCTAAT...
Protein
Download Protein FASTA112 aa · LXL04_000175|LXL04_000175|OH1004|PROTEIN
MGCLRLTQRQWLFGKGKDLQFIGEGDGWCWRGRKDVIYLDESFSHEAVNDENSFELGIISLVCWGVAEIPQIITNFRSKSSHGVSLIFLLTWIPGDIFNLVWCQWCRDIPNM
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_000175 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_000175 |
|---|---|
| Location | Chr01:3622363-3622989 (+) |
| Description | Similar to RTC2: Probable vacuolar amino acid transporter YPQ3 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0003333 amino acid transmembrane transport Biological Process GO:0015802 basic amino acid transport Biological Process GO:0034486 vacuolar transmembrane transport Biological Process GO:0034488 basic amino acid transmembrane export from vacuole Biological Process GO:0090513 L-histidine transmembrane import into vacuole Biological Process GO:0005739 mitochondrion Cellular Component GO:0005794 Golgi apparatus Cellular Component GO:0016020 membrane Cellular Component GO:0031966 mitochondrial membrane Cellular Component GO:0032153 cell division site Cellular Component GO:0051286 cell tip Cellular Component GO:0005290 L-histidine transmembrane transporter activity Molecular Function |
| KEGG gene cross-reference | sce:YBR147W spo:2541787 spo:2542262 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04193.20PQ-loop56-103 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_000175 | PF04193.20 | PQ-loop | 56 | 103 | 7e-18 | 64.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.