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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA08G119270
Query referenceTK1151
LocationChr08:31052339-31056303 (+)
DescriptionSimilar to NAP1%3B2: Nucleosome assembly protein 1%3B2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032201 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g56950 May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity).
Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1365-313x.2009.03844.x
A truncated Arabidopsis NUCLEOSOME ASSEMBLY PROTEIN 1, AtNAP1;3T, alters plant growth responses to abscisic acid and salt in the Atnap1;3-2 mutant.2009 · DOI: 10.1093/mp/ssp026
At2g19480 May modulate chromatin structure by regulation of nucleosome assembly/disassembly (By similarity).
Molecular and reverse genetic characterization of NUCLEOSOME ASSEMBLY PROTEIN1 (NAP1) genes unravels their function in transcription and nucleotide excision repair in Arabidopsis thaliana.2009 · DOI: 10.1111/j.1365-313x.2009.03844.x

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: B8AW64 May modulate chromatin structure by regulation of nucleosome assembly/disassembly. No verified direct reference in this release
Os05g0539700 May modulate chromatin structure by regulation of nucleosome assembly/disassembly. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000724double-strand break repair via homologous recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006334nucleosome assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009294DNA-mediated transformationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016444somatic cell DNA recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003682chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151; UniProt GO evidence=IPI:IntActUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G19480KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.837; coverage=80.739; evalue=1.66e-150UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G56950KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=68.241; coverage=100.528; evalue=5.1e-151UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os05g0539700KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGnta:107760768KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.094; coverage=101.319; evalue=3.28e-155UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGosa:4339460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.292; coverage=99.472; evalue=1.39e-163UniProtKB/Swiss-Prot DAT 2026 current_release